Hemitrygon akajei (red stingray): 140727537
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Entry
140727537 CDS
T11019
Symbol
ttc3
Name
(RefSeq) E3 ubiquitin-protein ligase TTC3 isoform X1
KO
K15712
E3 ubiquitin-protein ligase TTC3 [EC:
2.3.2.27
]
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
haka04121
]
140727537 (ttc3)
Enzymes [BR:
haka01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140727537 (ttc3)
Ubiquitin system [BR:
haka04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140727537 (ttc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC3
TTC3_DZIP3_dom
wHTH_TTC3
TTC3_9th
TPR_1
zf-RING_2
TPR_11
TPR_2
zf-rbx1
TPR_16
zf-C3HC4_2
TPR_12
zf-C3HC4
CARD
TPR_14
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
ANAPC3
zf-RING_11
zf-ANAPC11
zf-RING_16
TPR_17
TPR_9
RINGv
FANCL_C
DUF7336
Motif
Other DBs
NCBI-GeneID:
140727537
NCBI-ProteinID:
XP_072901093
LinkDB
All DBs
Position
5:complement(21356773..21534640)
Genome browser
AA seq
1920 aa
AA seq
DB search
MDDSSSDSDDVKLITTFTSKKISEKHSRKMKPKNNMETAEIWCSDIQTIHVLFYQRWHMI
KLHILWPYLFVQKKKHDRYLEWAIAAKFLDPENYDIFELNLIKLRDIELLEEVLHAIRKH
SDSLAFLTCLLDLWDKVDENNCDLDDAIAMIEKTKELNNLQVEVNSGAEHSRKAAIAIGC
FQYAYFIKLFMCPENIPNLVPNRDAMESEAYKERGNEEFKRKDYEAALKWYSRAIDLCPD
NEILYGNRALCFFRIEKYKKALGDGKRAIILKPSWTKGHYRFCDALFLMGEHKRAIEAND
KAQELCKDDSDGIRDLVQQKSKFLKRLQDENLEKAKTDALKKELSTEKAQPLLATQPLSE
DHKNESKRNQEKHGLKSRISPWPKKVMMPLDSADTLMDKLKSLIQAGHVALSDQRARNAE
HAFLQVLKLLDPEKLEEVSLSTVDYVIIIYGHACALLGIGLPEELTEAENQFNKILEQFP
EQRLDCLAFYGLGKVYFQQNRFTSALDPFSKSLTMVNRKIVPGILTWPTTTVVIEETQNE
KLKALLEEYIGNCQFPPQPDAICRFQHCQGHSKTQIYFSDPGFKGFIQMICILHCRLEYH
INCWKKLKATSFQDKNDKDFLKDPCFTPDCGGKISKIVIYDSKGLVKCEFEAKIMKNKES
SKAVIKQKCSSALKLKIKEDRKQTRKLRKEASKYNAEKQIKENTEKNSRIEEANSKTGQS
WNPFGDRMLQLIIKEKEKLKAGEWNVSNLLQELQSDGVLSKEECDNISAGASKPCQVMGQ
LLDLIVQKNNRVKTRAFLYTLTKCQEVDNKLLDWINWLNDAGREAAGLFLLRYSKFIEQL
DLDCLLNLLKVSEIDLPLYNSTEDIVEQLKQESPTKIRNLIWTLEEKREQFPSLHNPLDQ
YFNAMDAPCTVLKKQENEELLNTGLKSKMRNRKKKPKDSKSVILLPGMFGSGAREEDDDD
DEVNSNESNLVHMNSMDFFAVPDYLSQQIQTFEQFYTGSSDSSNYQQLLNNNPDPARESL
YDYFAQILREHGPMEIDNPLLVGEFEDFPPETQELVQNTGGLKSFLMESLRFVLNNNLVG
LMKHAEELESLVINDKAATRSTETSETNSAETSVESSRPVVHLNPAAKEFKPVSYYSSIL
ASNISSSSESQNNQYFLYSSDLGGDSSTGDGYIQINPYSDVSQKIYKSAIISEHNVKTGD
AMADHYLSVSECTAGFDPTFCGDPSSSTVHTDITQVIPAFSVHQSNLPVPNYNYQFHSLN
PDRGSDPIINEMESMNLPSGSTNTTGVSMLKVVPHSNSTTESSVGASDKMNMEYNYNNKK
LENKQCPLLRTIGVQVHQESLCNTNINTDPFQPFENQQGDILRIEKEHNVLQQKLQEAEE
KYNQLANRSKNEITALEEKMSEFIQKNQLLKSELDSVRHVLETEIKKSQQEKRENNETLK
KLRSEVKSLAELNQMYTQNIQEKDQLYEKCLKEFEEISDQSSIEKRKAEEAIQKSVDMYH
ETRQRASEAEVAILEGRQKVQLFSHYKAAEDTRRTLEKFKELNASTPATAIPQLQMSIVA
WEHFLFETEQQIHQTEIRFKDQINQVKAGMQLNSLATVTIPNLPVPPSSSVMVEKLTIDD
PAIIASYPCAAPQMLGLHNKQHSPPVPHLPSVTGATKEKPKPPSGFQNQRSSNHLHPGAA
LTKPQSAWAQASSRSESPVASEPTSCHETQPSTSQSTHEKSQQPKKSFDKIITRLLAMFP
NHTHASLTLFIKEVRSANGGSLSGLMIDEIISQVAERILDHQDKKKVQFPSANFQHATFP
TDQRSTSATREVPKMDSAIRKIRTPEDLPHPWQPIRTQTASQWQGSDSTTFDEEPCIICH
DDLTPDSMFTLPCKHHFHEECIKQWLKANRTCPTCRVYAVLPEDFPVLPGMLTAQNFHFP
NT seq
5763 nt
NT seq
+upstream
nt +downstream
nt
atggatgattctagttcagactcggatgatgtcaagctgatcaccacctttacgagtaag
aaaatatctgaaaaacatagtcgtaaaatgaagcccaaaaataatatggaaacagctgag
atctggtgttctgacattcagacaattcatgtacttttttaccagcgttggcatatgata
aaactgcacatcttatggccctatttattcgttcagaagaaaaaacatgatcgctatcta
gagtgggctatcgcagccaaattcctagatccagagaattacgatatttttgaattgaat
ttgataaagctgcgagatattgaactcttagaagaagtgctccatgcaataaggaaacac
agtgactctctagcatttctgacttgtttattggatttatgggataaagtagatgagaat
aattgtgacctggatgatgctattgctatgatagaaaaaacaaaagaacttaacaatttg
caagtggaggtgaattcaggagcagaacattcaagaaaggcagctattgcaattgggtgt
tttcaatatgcatattttattaagctgtttatgtgccctgaaaatattcctaatttagtg
ccaaacagagatgctatggaaagtgaagcctataaagaaaggggcaatgaggaatttaaa
aggaaagactatgaagctgctttgaagtggtactccagggcaattgatttatgtcctgac
aatgaaattctgtatggaaacagagctctgtgctttttccgtattgaaaaatacaaaaaa
gcgcttggtgatggaaaaagagccataatcttaaaaccttcttggaccaagggtcattat
cgcttttgtgatgccttgtttttgatgggagaacacaaacgtgctattgaagcaaatgac
aaggctcaagaattatgcaaagatgattcagatggaattcgagacttagttcagcagaaa
tcaaaattccttaaaagactacaggatgaaaatcttgaaaaagcaaagactgatgcatta
aagaaagaattaagcactgaaaaagcgcagccactattagccactcagccattaagtgaa
gatcataagaatgagtccaaaaggaaccaggaaaaacatggtttaaagagtcgcatttca
ccatggccaaagaaggtaatgatgcctttagacagtgcagatactttaatggataaattg
aagtcactgattcaggctggacatgtagccttatcagaccagcgtgcccgcaatgcagaa
catgccttcttgcaggttctgaagttattggatccagagaaacttgaggaagtatctttg
tccactgttgactatgtaataataatctatggtcatgcctgtgccctccttggtattgga
ctgcctgaggagttgactgaggctgaaaatcaatttaataaaattttggagcaatttcca
gaacagcggcttgactgtttggcattctatggacttggcaaagtgtactttcagcagaac
agatttaccagtgctttagatcctttcagtaaatcgttaactatggtaaaccgtaagatt
gtaccaggcatactaacgtggcccacaacaactgttgttatcgaagaaacacaaaatgaa
aaattgaaggcattgttagaagaatacataggaaactgtcaattcccacctcaaccagat
gcaatctgccgctttcaacattgccaaggccattctaagactcagatatatttctccgac
ccaggtttcaagggctttattcaaatgatatgcatcctacattgccgtttagagtaccat
atcaactgttggaaaaaattgaaggcaacttcatttcaagataaaaatgacaaggatttt
ctgaaagatccatgtttcactccagattgtggagggaaaatttccaaaattgtcatctat
gattcaaaaggtcttgtgaaatgtgagtttgaggctaaaataatgaaaaacaaagaatcc
tcaaaagcagtcattaaacagaaatgctcaagtgctttgaagttaaagattaaggaagat
cgtaaacaaaccagaaaattaagaaaagaagcatcaaaatacaatgctgaaaaacaaatt
aaggaaaatactgaaaagaatagtaggattgaagaagccaattctaaaacgggtcaatct
tggaatccttttggtgatcgaatgctgcagttgataattaaagagaaagaaaaattaaaa
gctggagagtggaacgtttcaaatctacttcaagaattacaatccgacggggttctaagc
aaagaggagtgtgataatatatctgcaggtgcctccaaaccatgtcaagttatgggccaa
cttctcgatctcattgtgcagaagaataacagagtaaagacaagggcattcctttacaca
cttacaaaatgccaggaagttgacaacaaactgttagattggattaattggttaaatgat
gcagggcgtgaagcagcaggattgttcttgcttcgttattcgaaattcatagagcaattg
gacttggactgtctactgaacttgctcaaagtatctgagatagatctaccactatataac
agcaccgaagacattgtagaacagttgaaacaagaatcacccactaaaatccgtaacttg
atctggacattggaagagaaaagagagcaatttccttccttgcataatcctttagatcaa
tattttaatgcaatggatgctccttgtactgtactaaagaaacaagaaaatgaagaatta
cttaatactggccttaaaagtaaaatgcggaacagaaaaaagaagccaaaggattcaaag
tctgtgatccttctgcctgggatgtttggaagtggagctcgtgaagaggatgatgatgat
gatgaagtaaactcaaatgaaagcaacctagtgcacatgaactccatggatttttttgca
gtaccagattatctgagtcagcaaatccagacgtttgaacaattctacactggtagttca
gatagtagtaattatcagcaacttctcaacaataatccagacccagcacgtgaaagttta
tatgattactttgcccaaattctgagagaacatggcccaatggaaattgacaacccgttg
ttggttggcgagtttgaagacttcccaccagagactcaagagctggtgcaaaacacgggt
ggtttgaaatcatttcttatggagtcattgcgatttgtgctgaataacaacttggttgga
ctcatgaagcatgcagaggaattggagagtttggtcataaatgataaagcagcaaccagg
agcacagaaacatcagagacaaactcagctgaaacttctgttgaaagctcaagaccagta
gttcatctcaatcctgctgcaaaagaatttaaaccagtatcttactattcatccatattg
gcgtcaaatataagttcatcaagcgaatcacaaaataatcaatattttctttatagtagt
gatctgggaggtgatagttcaacaggtgatggatatatacaaattaatccttattctgat
gtgagtcaaaagatttataaatcagccatcatatcagaacataatgtgaagactggagat
gcaatggctgatcattacttgagtgtttctgaatgtacagcaggttttgatccaactttc
tgtggtgatccatcatccagtactgtgcacactgatataacacaagtaatcccagcgttt
tctgtacaccaatcaaacctaccagttcctaattataattatcagtttcattctctcaat
cctgatagagggagtgatcctataataaatgaaatggaaagtatgaatcttccatctggt
agtactaatacaacgggagtaagcatgcttaaggtggtgcctcacagcaattccacaaca
gaaagttctgttggagcatcagacaagatgaatatggaatacaattataataataaaaag
cttgaaaataaacaatgcccattactaaggaccattggagtacaggttcatcaggaatct
ttatgtaataccaatatcaatactgatccttttcagccatttgaaaatcaacagggtgat
attttgaggattgagaaagaacataatgttctccagcaaaagctacaagaagcagaagaa
aaatataatcagcttgcaaatcgcagcaagaatgaaattactgctcttgaggaaaagatg
tctgaattcatacaaaaaaatcagctattaaaatctgagcttgactcagttcgacatgtc
ttggagactgaaattaagaagagtcagcaggagaagcgagaaaataatgaaaccttaaaa
aaactcagatcagaagtgaaatctcttgctgagctgaatcaaatgtacactcaaaatata
caggagaaagaccagctttatgaaaaatgcttgaaggaatttgaggaaataagtgatcag
tcatcaatagaaaagagaaaagcagaagaagccattcagaagagtgttgatatgtaccat
gaaacccggcagagagccagtgaagcagaggtggctatactagaaggccggcagaaagta
cagttattttctcattacaaagcagctgaagatacaagacgtactttggaaaaatttaaa
gaattgaatgccagtacaccagccacagctattccacaactacagatgtccattgttgcc
tgggagcattttctatttgaaactgaacagcaaatccatcaaactgagatacgctttaaa
gatcagattaatcaggtgaaagctgggatgcagttaaacagcttggcaacagtgactata
ccgaacctcccagtaccaccaagctctagtgtaatggtggaaaagttgactattgatgat
cctgccattattgcatcttacccttgtgctgctcctcagatgctcgggttacataacaaa
caacatagtccaccagttccacacctgccttcagtcacaggagccacgaaagaaaagcca
aagcctccatctggcttccagaaccagagatcctcaaaccatttacatcctggtgctgct
ttgaccaagcctcagtctgcctgggcacaagcaagcagtcgatcagaatcacctgtagca
tctgaacccacaagctgtcacgaaacacagccttctacaagccagtctacacatgaaaaa
tctcagcaacccaagaaaagctttgataagataattacccgccttttagccatgtttcct
aatcatacacatgctagcctgactctcttcattaaggaagttcgtagtgcaaatggaggt
tccctttctggattaatgattgatgaaataatcagccaagtggcggaacgcatcctcgat
catcaggacaaaaaaaaggtccagtttccatctgctaactttcaacatgcaacattccca
actgaccaaagatccacttctgccacaagagaagtcccaaaaatggactcagccatcagg
aagatcagaacaccagaagatcttccccatccttggcaaccaatcagaactcagactgct
tcacagtggcaggggagcgatagcacaacatttgatgaagagccatgtattatttgtcat
gatgatttgacaccagacagcatgtttacgctgccatgcaaacatcactttcatgaagag
tgcatcaagcagtggctgaaagcaaataggacctgtccgacatgtcgagtctatgctgta
ctgcctgaggacttccctgtgctgcctggaatgttaactgcacaaaacttccactttccg
taa
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