KEGG   Hemitrygon akajei (red stingray): 140731844
Entry
140731844         CDS       T11019                                 
Name
(RefSeq) lysine-specific demethylase 2B-like isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
haka  Hemitrygon akajei (red stingray)
Pathway
haka03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:haka00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    140731844
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:haka03000]
    140731844
   04121 Ubiquitin system [BR:haka04121]
    140731844
   03036 Chromosome and associated proteins [BR:haka03036]
    140731844
Enzymes [BR:haka01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     140731844
Transcription factors [BR:haka03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    140731844
Ubiquitin system [BR:haka04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     140731844
Chromosome and associated proteins [BR:haka03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    140731844
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     140731844
SSDB
Motif
Pfam: PHD_4 zf-CXXC DUF7885 F-box-like F-box LRR_4
Other DBs
NCBI-GeneID: 140731844
NCBI-ProteinID: XP_072909847
LinkDB
Position
8:complement(44232268..44451119)
AA seq 740 aa
MALSPDDEDYDTSQSRASARLKPRPTPSSGPKILPHKSTSGARRRRTRCRKCEACLRTEC
GECHFCKDMKKFGGPGRMKQSCIKRQCIAPVLPHTAVCKICGEAGKEDNVVDEAEKFNAS
LMECSICNEIIHPGCLKVEESEGLINDELPNCWECPKCNQEGKTGKKRGPGFKFASNLPG
SLLKEFKEGEDGGRRKSEDLERPRMEEYHSNRRKSDDGLGLKRRKDKDLPTDLGPRKKLR
GGKDDKLQKRKKRKLTPDSEESSKVKHLERSEHADRIERIRQMMKRVNRSEVSSSSSSSD
SDSDSSSGSESSIQRSEGSSGESSPRSIAKTDSQRSKLRRFSNDIFSEEDDEEEEDEDEE
NARNTKSKLLSLASKVAENNYYSLRGENIQKNSFRTVEVSLKKKNGPSSQLCHKVLGNIS
RPRILSKLPVQSPPKPFQMERHVVRPPPDSPEPDSLPLTSGSEHVVQREVWLAIFSYLSH
RDLCICMRVCKTWNKWCCDKRLWTTINLSRCKSITPTMLSGIIRRQPIILDLSWTNVSKK
QLSWLINKLQNLKILALAGCIWSAISALCTSSCPRLRMLDLRWVEDLKDSQMKELLSPPT
DCRVGHNQSKLCNVTEFHLAGLDITDCSLALMIRYMPMLNKLDLSQCNHVTDQSIALLTA
AGSSTRETLTEINLSGCHRITDQCLLLLQHCPNLNRIDLRNCKLISPQACQQLVEGLVGV
APFELVEDKLLKRSGLQLTK
NT seq 2223 nt   +upstreamnt  +downstreamnt
atggcactgagtcctgatgatgaagactatgacacctctcagtccagggcctcagcaaga
ttaaaacctcggccaaccccttcatcaggacccaaaatccttcctcataaatcaaccagt
ggtgcgcgtagacgcagaacgcgatgtcgcaaatgcgaagcctgcttgcggacagagtgt
ggagaatgccacttctgcaaagacatgaagaagtttggtggccctggcagaatgaagcag
tcctgtatcaagaggcaatgtattgctcctgtattaccacacactgcagtatgcaagatc
tgcggtgaggcaggaaaggaagacaatgtggtggatgaagcagagaaatttaatgctagc
ttaatggaatgctccatctgcaatgaaataatacacccaggttgtttaaaggtagaagag
tctgaagggctcattaatgatgaattaccaaattgctgggaatgtccaaagtgtaatcag
gaaggaaaaactggcaaaaagagaggccctgggtttaaattcgcctccaatcttcctggg
tctctcttaaaggagtttaaagaaggggaagatggagggcgacggaaatctgaagatctt
gaacgtccaagaatggaggaatatcattccaataggcgaaaatctgatgatgggcttgga
ctcaaacgcagaaaagacaaagatcttccaacagatttgggtccaaggaaaaagctgaga
ggaggaaaagatgacaaacttcaaaagaggaagaaaaggaaactaacgccagattccgaa
gaatctagtaaagtaaaacacctggaaagatcagagcatgcggataggatagaacggata
cgacaaatgatgaaacgtgtcaacagaagtgaagtcagcagctccagctctagttcagat
tctgactccgattctagctccggttcagaatcaagcatccagagatcagaaggaagcagt
ggagaatctagtccaaggtctattgcaaagacagatagccaaaggtcaaaactcagaaga
ttttccaatgacatttttagtgaggaggatgatgaggaagaagaggatgaagatgaagag
aatgcaaggaatacaaaatccaaactgctttctttggcttcaaaagttgcagaaaataac
tattattccttaagaggggaaaatattcaaaaaaactccttcaggacagtggaggtttca
ttaaaaaagaaaaatggaccatccagtcagctttgtcacaaagttctaggaaatatatct
cgacctcggatactaagcaaactcccggtgcagtctcctcccaagccatttcaaatggag
agacacgtggttcgtcctccacccgacagccctgaacctgattctttaccacttactagt
ggatcagaacatgtggtgcaaagagaagtgtggctggcaatattcagttacctaagccat
agagacctatgcatctgtatgagagtatgcaagacgtggaataaatggtgttgtgacaag
cggttatggaccaccattaacttaagtcgttgtaaatctatcactccaacaatgctgagt
gggatcatcaggagacagcccatcatactggaccttagctggacaaatgtctcgaaaaag
caactcagttggctcataaacaagctgcaaaatttgaaaattctggcactagcaggatgc
atttggagtgcaatctctgcactttgtacatcaagttgtcctcgtctgcgcatgcttgat
cttcgttgggtggaggatctcaaagactcacagatgaaggagttgttgtcaccacctaca
gattgcagagtaggtcataaccagagcaaactctgcaacgtgacagaatttcacttagca
ggtttggatattactgactgctcgttggccttgatgatacgctacatgccaatgctaaac
aagctggacctgagtcagtgtaaccacgtgactgatcaatccattgccctcttgacagct
gctggatcttccacacgagaaacactgactgaaataaacctttcaggttgccatcgaata
acagaccagtgcctgttgctgcttcaacactgcccaaaccttaaccgaatcgaccttcgg
aactgcaaactgatttctccccaggcttgtcaacagctggtggaagggctcgtaggtgtc
gccccctttgaactcgtggaagacaaactgttaaagagaagcggtttacaattgacaaag
tag

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