Hemitrygon akajei (red stingray): 140733727
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Entry
140733727 CDS
T11019
Symbol
dse
Name
(RefSeq) dermatan-sulfate epimerase
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
haka01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
140733727 (dse)
Enzymes [BR:
haka01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
140733727 (dse)
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Gene cluster
GFIT
Motif
Pfam:
DUF4962
DUF6400
GrpE
Motif
Other DBs
NCBI-GeneID:
140733727
NCBI-ProteinID:
XP_072913536
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All DBs
Position
9:166528716..166627876
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AA seq
952 aa
AA seq
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MKIYTHGVPVIILISYFSLLTHTTIGGSIHFMNGNYDGHPMLYFSKGDVEDLRLKAKTTH
RHIANSIWDAIQVMLSNPKEYLPPWDPKQFSARWNEIYGNNLGVLSMFCVLFPERTDAVE
FAMDYMARMASQPSWLVKDAAWDEVPLAHSLVGFATAYDFLYDQLNKTQQERYLEVISDA
SQYMYEKSFSRGWGFQYLHNHQPTNCVALLTGSLVLLNQGFLQEAYLWAKQVIIILEKSM
VLLKDIKDGSLNEGVAYGSYTTRSLFQYMFLVKRHFNISHFSHPWVKQHFAFYYRTVLPG
FQRTVGIADSNYNWFYGPESQLVFLDTYIMRNGSGNWLAEQVRKNRIQRGTGSPAKAQRW
CTLHTEFLWYDSSLPPVPPADYGLPKLHYFEDWGVVTYGGALPAGLNRPFLSFKSGKLGG
HAIYDVVHEKKYSQWIRGWTNFNAGHEHPDQNSFTFVPNGVPFITEALYGPKYSFLNNVL
MFSPTTSDTCFKHWEGQVTEACNSKWLKYKNGISGDCHGQVIAALEQSGVVFIRGEAVGA
YSPSLKLKSSQRNLLLLEPQLLLLVDQIHLEEGSSLEKMSAFFHNTDVAFQETSRDGVNG
AFVQQKDGRYRMFWMDDKGRSEKATLAFKSYPRGYSYNGTHYVNVTTTLRYPVTRTAYIF
FGPSVEIQSFSIRGDLDRVDIFLATNEKTYTVYLLTGQTAVKPLFAMVLADRQKIVFDRA
SAIRDVSVQEAQDYANVVEGNLQHAKSVFQQLEKQILARVLNTDNFRKTAERLLKQSDKR
KTEEAIEKFFSVSFEQSKTKKIKKGKGDGVKLPNALPNIFAQIEMTEKRERQKLLQQMRE
ETSDERNDNMREIFDFVDDSYVKQEQGTNRNIRHGYVKPGTTVRSTAQSLSASYTRVFLI
LNIATFFFLLALQLIRFQKAPSLHAQRFLYAVLLLDSFVLLCLYSSCSQAQC
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttacacacatggagtaccagtgataattttgataagttacttctcccttttg
acacatacaacaattggtggcagcatccactttatgaatgggaattacgatggtcacccg
atgctgtacttcagtaaaggcgatgtggaagatctgcgactcaaggcaaaaactactcac
cggcacattgcgaacagtatttgggacgccatacaggtcatgctatcaaacccaaaggaa
tatctgcctccctgggaccccaaacaattcagcgctcgatggaatgaaatctatggcaac
aacctgggcgtcttgtctatgttttgtgtcttgtttccggagcgaacagatgctgtggag
tttgccatggactacatggcgaggatggcatctcagcctagttggctcgtcaaggacgcc
gcatgggatgaggttccactcgctcactcactcgtgggttttgccactgcgtatgacttt
ctgtatgaccaactgaacaaaactcagcaggaaagatatttagaagtcatcagtgatgcc
tcccagtacatgtacgagaagtctttcagtcgtggatggggatttcagtatctgcacaat
catcaacccaccaactgtgtggccttgttgacaggaagcctggttctcttgaatcaaggt
ttcctccaagaagcttacttatgggcaaaacaggttatcattattctggagaagtcgatg
gttttgctaaaggacattaaggatggatccttgaacgaaggtgtggcttatggcagttac
accacaagatctctgttccagtacatgtttctggtgaaaaggcatttcaacatcagccat
ttcagtcatccctgggttaagcagcattttgcattctattataggaccgtgcttccaggt
tttcaaaggactgtgggcatagctgattcaaactacaactggttttacgggccagagagc
caactggtgtttctggatacctacatcatgcgcaatggcagtggtaactggctggcagag
caggtcaggaagaatcggattcagcgaggaacagggtcgcctgccaaagcacagcgatgg
tgcacgctccacacagagttcttgtggtacgacagctccttgcctccagtcccacctgca
gattatgggttaccgaaattacattacttcgaagattggggggtcgtgacctatggaggt
gctttaccagcaggacttaatcggcccttcctgtccttcaaatctggcaaactgggaggc
catgcgatttacgacgtcgttcatgaaaagaagtattcgcagtggattcgcggatggacg
aatttcaatgccgggcatgaacatcccgatcagaattctttcacgtttgtgcctaatggt
gtgccttttatcacagaggccttatacggcccaaaatacagcttcctcaacaatgttttg
atgttctctccaaccacatcagacacttgtttcaagcattgggaggggcaagtgacagag
gcgtgcaactcaaagtggttgaagtataaaaacggcatttctggggattgccacggccag
gtcatcgcggctctggagcagagtggtgtggtctttatccgcggagaggcagtgggcgct
tatagccctagcctgaagctgaagagttctcagaggaaccttctgctcctagaaccgcag
ctgttactgttagtggatcaaatccacttggaagaaggtagctcgcttgagaaaatgagt
gcttttttccacaacacagacgtggcctttcaggaaacctcaagagatggggtgaatggg
gcatttgttcagcaaaaggatggccggtatagaatgttctggatggatgataaaggcaga
agtgaaaaggccacgctggcgttcaagtcctaccctcgtgggtactcatacaatggaacg
cattatgtgaacgttacaaccacattgaggtacccagtgactaggacagcctatatcttc
tttggaccttcagtggagattcaaagctttagcattcgaggggatttggatcgagtggat
atatttttagcaacaaatgagaaaacgtatacagtatacctcttgacagggcagactgcc
gtgaaaccactttttgctatggtactagccgaccgccagaaaattgtttttgacagggct
tctgcaatcagggatgtttcagtgcaggaagcgcaagattatgcgaatgtcgttgaggga
aatcttcagcacgcaaagtcagtttttcagcaactggagaaacagatcttggcccgagtc
ttgaacaccgacaactttcgaaagaccgctgagcgtcttctaaaacaatcggacaaaagg
aagacggaggaagccattgaaaagtttttctctgtctcatttgaacaaagcaagacaaaa
aagattaaaaaagggaaaggcgatggagttaaacttcccaatgcccttccaaatatattt
gcacaaattgaaatgactgagaaaagagagcgacagaaattattgcagcaaatgcgagaa
gaaacctctgatgagagaaatgataatatgagggagatttttgattttgtggatgatagt
tatgtaaaacaggaacaaggcacaaacagaaatataagacatggttatgtcaaaccagga
accactgttcgaagtactgcacaatccctttcagcttcatacacaagagtgttcttaatt
ttaaacatagcaactttctttttcctattagctttacagctaattcggtttcagaaagct
ccaagcttgcacgcccaaagatttctatacgccgtgcttcttttggatagctttgtgctt
ctctgtttgtattcctcttgttcccaagcacagtgctag
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