Hemitrygon akajei (red stingray): 140734256
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Entry
140734256 CDS
T11019
Name
(RefSeq) short transient receptor potential channel 5-like
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
haka01009
]
140734256
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
haka04040
]
140734256
Protein phosphatases and associated proteins [BR:
haka01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
140734256
Ion channels [BR:
haka04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
140734256
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PKD_channel
YVC1_C
DUF5382_C
Motif
Other DBs
NCBI-GeneID:
140734256
NCBI-ProteinID:
XP_072914081
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All DBs
Position
10:complement(29471467..29603815)
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AA seq
992 aa
AA seq
DB search
MAQLYYKKANYSPYIDRIPLQIVRAESELSLEEKAYLNAVEKGDYASVKQALEEAEIYFN
ININCTDPLGRSALLIAIENENLEIMELLLSFSVYVGDALLYAIRKEVVGAVELLLHYRK
PSGEKQVPPLLMDAQFSEFTPDITPIMLAAHTNNYEIIKLLVHGGVSIPRPHQVRCNCVE
CVSSTEVDSLRHSRSRLNVYRALASPSLIALSSEDPILTAFQLGWELKELSKVENEFKAE
YEELSQQCKLFAKDLLDQARSSRELEIILNHRDDQSDELDPQKCHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRRHWAVKLLTCVTIGFLFPILSVVYLVAPKSRLGLFI
KNPFIKFICHTGSYLTFLFLLLLASQHIVKTDLHMQGPPPTIVEWMILPWVLGFIWAEIK
EMWDGGFNEYVHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETSASEEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNIISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGATLPPP
FNIIPSPKSIWYLCKWLHTQICPSRDSKTEQKHENFKEFTERHADDLIQNQHYQEVIKNL
VKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGNRKSSRRTYSTSSDGMQI
GELDDDSAEEKINKIVSFSLAGESNDKKKLKMNSFSVSALIKSVSGIDLEEKSKNNRLSK
QSPSIQNGNRLQRYPNSKKDSFKRLGLLFSKMNGQLSESTPEPVSSISDGLLQAHNMWQD
FKYSQIASPNNKAKSESSLNAVGLNEVNRRNRIDSHCSTNHTDSFHCSSNISASNNKLID
SSSDVYDSWGEACDLLMTRWNSHQEDYVTTRL
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctgtactacaaaaaagccaactattctccgtacatagaccggatcccgttg
cagatcgtgcgcgcagaaagtgagctgtcgttggaggaaaaggcttacctgaatgcggtg
gaaaagggtgattatgccagtgtgaaacaggctctagaagaggctgagatctactttaat
atcaacatcaattgtacagatcctctggggcgcagtgcactcctcattgccattgagaat
gaaaacctagagattatggagctgctcctgagtttcagcgtctatgttggggatgccttg
ctttatgcaatacggaaggaagttgttggagctgtcgagcttctgctgcattatagaaag
ccaagtggagaaaagcaggttcctcctttactgatggatgcccagttctctgagttcact
ccggatattacacccataatgcttgctgcacacaccaataattatgagataataaaactt
ttggtgcatgggggtgtatccatcccccgaccccaccaagtgaggtgcaactgtgtggag
tgtgtctccagcacagaagttgacagccttcgtcattcaaggtcacgtctgaatgtctat
cgtgctctggccagcccttcattgatagctttgtcaagtgaagacccaatcctcacagcc
tttcagttgggttgggagctgaaggaactcagcaaagttgagaacgagttcaaggctgaa
tatgaggagctgtcgcagcagtgcaagctctttgccaaggaccttctggatcaagcacgc
agttcccgagagctcgagattatcctgaaccacagagatgaccagagtgatgaactcgac
ccccagaaatgccatgatctagccaagctcaaggtggccatcaagtaccatcagaaagag
tttgtcgctcagcctaactgccagcagctcctggctacgttgtggtatgacgggtttcct
ggctggcgtcgccggcactgggcagtgaagctcctgacctgcgttaccattgggtttctc
tttccaatactatctgtcgtgtacttggtggcgccaaagagcagactgggactgttcatc
aagaacccttttatcaaatttatttgccacactggatcctacctgaccttccttttcctg
ctgctgttggcgtctcagcacatcgtcaagacggatcttcacatgcaggggccaccacca
accattgtggagtggatgatattgccatgggttttaggttttatatgggctgagatcaag
gagatgtgggatggtggttttaatgaatatgtgcacgactggtggaacctgatggacttt
gctatgaactctttgtacctggccaccatctcactgaagattgttgcctacgtgaagtac
aatggctcacgtcctcgagaagagtgggagatgtggcacccgacactgatagctgaagcc
ctctttgctatagccaatatcttcagctcccttcgtttaatctcactgttcactgcaaac
tctcacctgggaccactgcagatttcactgggtcgcatgctccttgatattctcaagttc
ctcttcatctattgcctggtgttgcttgcttttgcaaatggactgaatcagctgtacttt
tactatgaaaccagcgcctcagaggagcccaacaattgcaagggaatacggtgtgagaag
caaaacaatgccttttcaacattgtttgaaacactgcagtccctgttttggtcggtgttc
gggctgttgaatttgtatgtcaccaatgtaaaagctcggcacgagttcacagagttcgtg
ggagcgaccatgttcggaacctacaacatcatctccttggttgtcttactcaacatgctg
attgccatgatgaataactcttaccagctcattgcagaccatgctgacattgaatggaaa
tttgccaggacaaagctttggatgagttactttgatgaaggtgcaactcttccaccgcct
ttcaacatcatccccagcccaaaatccatctggtacctctgtaaatggctgcacactcag
atctgtccaagcagggattcgaagacggagcaaaagcacgagaacttcaaagaatttaca
gaacgtcatgcagatgacttgatccaaaaccaacactaccaggaggttattaaaaattta
gtgaaaaggtatgttgcagctatgatcagaagtgccaaaactgatgaaggacttacagaa
gagaattttaaggaactaaaacaagacatctccagttttcgctatgaggttctcgacctg
ctgggaaacagaaaatcgtctcgaagaacatactcgaccagcagtgatgggatgcagata
ggagaattggatgatgatagtgcagaagaaaagataaataaaatagtctcattcagtttg
gctggagaaagcaatgacaagaagaagttgaaaatgaactctttcagtgtctctgctcta
ataaaatcagtttctggaattgatcttgaagagaagtcaaaaaataacagattgagcaag
caatctccatcaatccaaaatgggaatcgattgcagaggtacccaaactccaagaaggat
tcttttaaaaggcttggtcttctgtttagcaagatgaatggtcaactctcagaatcaact
ccagagcctgtctccagtatttctgatggactgcttcaggcacacaatatgtggcaggac
ttcaagtattcccagattgccagccctaacaataaagcaaagagtgagagtagtcttaat
gctgttggtcttaatgaggtcaacagaagaaacagaattgatagccattgttcaactaac
catacagactcatttcattgttcttccaatattagtgcctccaacaacaaactcattgac
tcgtcaagtgatgtctatgactcttggggggaagcctgtgatttgctaatgaccagatgg
aatagccaccaggaggattatgtaacaacccgattataa
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