Hemitrygon akajei (red stingray): 140735486
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Entry
140735486 CDS
T11019
Symbol
smcr8a
Name
(RefSeq) guanine nucleotide exchange protein smcr8a isoform X1
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
140735486 (smcr8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
haka04131
]
140735486 (smcr8a)
Membrane trafficking [BR:
haka04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
140735486 (smcr8a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
140735486
NCBI-ProteinID:
XP_072916737
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Position
11:36768650..36779445
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AA seq
933 aa
AA seq
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MIAAPDVVALTREDDYGEQYNIEPAPPFQFQPENPWSKTATAKFEKDFILISEFSEQVGP
QPLLTIPDNARGNFDLNYFSLRIMSVDYQASFVGHPPGTSYPKLNFVEDSKVVLGDSKEG
AFAYVHHLTLYDLEARGFVRPFCVAYISTDENKIMQQFQELSADFSKASECLKAGNRKAF
ANELEKKLQDLEYTRNVLHNETEIQKKSNDKGYYSSIAIEKANELANVEKCIIEHQDLLM
QIRNYSYKKTRDMDYFSYEQDNGTEHSDSGLEQLPNKDELYEKNNFSDTSSYIPKFTKAK
SAKCFEKKLKTLEELCDSYFFNQTLEQLRQVEKFFRGDVCYLLTSQIEKVLLQQQQTTFF
LFEDPLLFTGEGQHCEKPLPSFNIIRAKVFEHPCLSTQSSNCESYKSCVESVPIKLDQQT
SVENYHGTVADSIPCKNLLATSDHLELKGKGSISSGESIEILGTEKSCPAPVLLLKSDSQ
IDLQSPHLEVVRRKFVGTKRTNSEDSIEVLSTTETLIPEDLKPMYPSAIHEEESPLDEED
IGLNNTEQGLVQLDANLNHTNGFSNTNFENRTITLSVLSEPVDHSCCIGKESPHFTKSVP
TFLTEEYGDEVVNVPPQRSKTIGQIFHSDYLQKNDGHGLYETVCEKECSDLPSNEETAQI
SMDEYLDNTSYISASLCSDRTPSPALATSPSKRSFGKRKKHSGKNSLWFIRHYSFAQQAI
FSLLSGRTLVVVGEQEGKVKKIVDALSIFVPNYNRDAESVKQWVTFPLHVDDLQTWKLIG
LQRIASPLGTSMLHSLNRYSRYVSILDCDNKTLRCPQYKGQLITRLADHRTQIKRGSTYY
MHVHSMFTQLCSQAFLYTFCHHLHLPIDERESEESVTHRRVNFLKHHLGLMNDDSKIVQY
FSELIKMHYLHEPPKGLNLALRFNYIPSVVFKI
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgatcgctgcccccgatgtcgtagctctcacccgcgaagatgactacggggagcagtac
aacatagagccggcacccccttttcaatttcaacctgaaaacccctggtccaagacggcc
acggctaaattcgagaaggatttcattctcatttccgagttttccgagcaggtaggccct
cagcctttgttaacgatcccggacaatgcccgcggtaactttgatctcaactatttctct
ctcaggattatgtctgtggattatcaagcctcgtttgtggggcaccctcctgggacgagt
tatccgaaactcaacttcgtcgaggactccaaggtggtgctgggggactctaaggagggg
gcttttgcttacgttcatcatttgactctctatgacttggaagcaaggggattcgtcagg
cctttctgcgtggcttacatctccacggatgaaaacaagattatgcagcagttccaagaa
ctttcggcggacttttccaaagcctccgagtgtttgaaagctggtaacagaaaagcgttt
gctaatgaactggaaaagaaacttcaggacctggaatatactaggaatgtgttgcacaat
gaaacggaaatccagaaaaagtccaacgataaaggatattactcctcgatagcaatagaa
aaggccaatgaactggctaatgtggaaaagtgtataattgaacatcaagatcttttgatg
cagattagaaattattcgtacaaaaaaacaagagacatggactacttttcttatgaacaa
gataatggtacagaacactcagactctgggttagagcagttgccaaataaggatgaatta
tatgaaaaaaataatttttctgatacaagctcctacatacccaaattcacaaaagctaag
tcagcaaaatgctttgaaaagaaactgaaaaccttagaggagctttgtgacagttacttt
tttaatcaaacattagaacaacttaggcaagtagagaaattcttcaggggggatgtgtgc
tacctcttgaccagtcagattgaaaaagtgcttcttcagcagcaacaaacaacttttttt
ctctttgaagacccactactcttcactggtgaaggacagcactgtgaaaaaccacttcct
agttttaatattatcagggctaaagtttttgaacacccttgtttatcaactcagtccagc
aactgtgagtcatacaaatcgtgtgtggagtctgtaccaatcaaactggatcagcaaacc
agtgttgagaattatcatgggactgtggctgattccattccatgcaaaaacctcctagca
acttcagaccatcttgaattgaaagggaaaggaagtatcagcagtggcgaaagcattgaa
atcctgggtacagaaaaatcctgcccggccccagtgttgttactcaaatctgacagccaa
atagacttgcagagcccgcacctggaggttgtgaggaggaaatttgtgggtaccaagcgg
acaaacagtgaggacagcattgaagttctaagtactactgaaactctgattcctgaagac
cttaagcctatgtatccaagtgcaatacatgaagaagaatcacctttggatgaagaagat
ataggactgaacaacactgaacaaggtctagtgcaattggatgcaaatctaaatcatact
aatggatttagcaatacaaattttgaaaatagaaccattaccttgtctgttttatctgag
ccagttgaccattcttgttgtattgggaaagagagtccacattttactaagtcagtacct
acatttttaactgaagagtacggtgatgaagttgtcaatgttccaccacaacgcagtaaa
actataggtcaaatattccacagtgattacctccagaaaaatgatggacatggattgtat
gaaaccgtctgtgaaaaagaatgcagtgatctacccagtaatgaagaaacagctcaaatt
tccatggatgagtatttggacaacacgagttacattagtgcatctttatgttctgatagg
actccttctccagccctcgcaaccagtccatcaaaaagatcctttggtaaacgcaagaag
cattcagggaaaaattctctgtggtttatacggcactattcttttgcacagcaggcaata
ttttcattgctgtctgggcggacccttgtagtagttggtgaacaagaaggaaaagtcaag
aagattgttgatgctttgtcgatatttgtccctaattataatagggatgcagagtctgta
aagcaatgggtaacttttcctttgcatgtcgacgatttgcagacttggaaactcatcgga
cttcaaagaatagcatcacctctgggtaccagtatgctgcattcgttgaatcgatacagt
cgctacgtcagcattctagactgtgacaacaaaactctccgttgcccgcaatataaagga
caactgattaccagattggcagaccataggactcagataaagcggggcagcacatattac
atgcacgttcatagtatgtttacccagctttgttcccaggctttcctctataccttttgc
catcacttgcatcttcccatcgatgaaagagaaagtgaagaatcggtcacgcatcgcaga
gtaaactttttgaagcatcatctggggctgatgaatgatgatagtaaaattgtgcaatac
ttttcagaactgataaaaatgcattacttgcatgaacctccaaagggcttgaatctagct
ctgcgatttaactacatccccagtgttgtgtttaaaatctaa
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