Hemitrygon akajei (red stingray): 140739112
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Entry
140739112 CDS
T11019
Symbol
sqstm1
Name
(RefSeq) sequestosome-1 isoform X1
KO
K14381
sequestosome 1
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04137
Mitophagy - animal
haka04140
Autophagy - animal
haka04217
Necroptosis
haka04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
140739112 (sqstm1)
04137 Mitophagy - animal
140739112 (sqstm1)
09143 Cell growth and death
04217 Necroptosis
140739112 (sqstm1)
04218 Cellular senescence
140739112 (sqstm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
haka04131
]
140739112 (sqstm1)
03029 Mitochondrial biogenesis [BR:
haka03029
]
140739112 (sqstm1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
haka04147
]
140739112 (sqstm1)
Membrane trafficking [BR:
haka04131
]
Autophagy
Mitophagy
Cargo receptors
140739112 (sqstm1)
Pexophagy
140739112 (sqstm1)
Aggrephagy
140739112 (sqstm1)
Xenophagy
140739112 (sqstm1)
ER-phagy
ER-phagy recepters
140739112 (sqstm1)
Other autophagy associated proteins
Midbophagy
140739112 (sqstm1)
Mitochondrial biogenesis [BR:
haka03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
140739112 (sqstm1)
Exosome [BR:
haka04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
140739112 (sqstm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
Motif
Other DBs
NCBI-GeneID:
140739112
NCBI-ProteinID:
XP_072923174
LinkDB
All DBs
Position
15:complement(4191142..4211948)
Genome browser
AA seq
448 aa
AA seq
DB search
MALTVKAYLLGKEENNREIRRFAVDHGVSASFAHLYQKVGSVFQTLRSDTFQMYYKDEEG
DMIAFSSDEELSMALSYLQDTTFRIYIKEKKEYKHGQDKSAGVVHPNIICNACNGPVIGP
RYKCSVCSDYDLCGSCKGKGFHKEHEMILLQTPQCFHPFETLDFKNCSMCTCGFGQRIPR
GMWFHKRRNGGPCRWAMAQQDPFAQVASCISKQQSAAAEPTPAEQGAATESMNQDRHVSY
LQGVGRNVAAMLNPLGIDVDIDVEHGGQRFKATGYSINSQAEPADSGSCPDLLTANQGKA
RGTSSLEQSEAALMDIEQSALNPHSPVDLNSIQGESKSASVDSNSEEEWTHLSPKGVDPS
TGELLSMQHLHLKEVESCEQVSIGLREAAEYPHLPQDAEPRLIEALSQMLSMGFHDDEGW
LTRLLQAKQCDIGAALDAMQPAKGSAHQ
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggctctcaccgtcaaggcctatctgctcggcaaggaagagaacaaccgtgagatccgg
cgcttcgccgtcgaccatggtgtctcggccagcttcgcgcacctttaccaaaaggtgggc
agcgtcttccagactctccgctccgacaccttccagatgtattacaaagatgaggaaggg
gacatgattgctttctccagtgacgaagagctgtccatggccctgtcctacctgcaggat
acaacttttcgcatctacattaaagaaaagaaggagtacaaacacggacaggacaagtcc
gctggtgtagtccatccaaacatcatctgtaatgcctgcaatggccccgtgattggccct
cgttacaagtgctccgtctgctccgactacgatctgtgtggcagctgcaagggcaagggc
ttccacaaggaacatgagatgattctcttgcagactccgcagtgcttccatccatttgag
actctggattttaaaaattgttcaatgtgtacctgtggctttggacagcggattcccagg
ggaatgtggtttcacaagaggaggaatggaggtccatgtcgctgggctatggcacaacaa
gatccctttgcccaggttgcatcgtgcatcagcaaacagcagtcagcagcagcggagcca
accccagctgagcaaggtgcagctactgagtccatgaaccaggacaggcatgtcagttat
ctgcagggtgtgggccgaaacgtggctgcaatgttgaaccccctgggtattgatgtcgac
attgatgtggaacacgggggccagcggtttaaagctactggatactccattaacagccag
gctgagcctgcagacagtggctcctgccctgatctactgactgccaaccagggcaaggca
agggggacctccagcctggagcagagtgaagcagctctaatggacatagaacagtctgcc
ctaaatccacattccccggtggatcttaactcaatacagggggagtccaagtctgccagt
gtcgacagcaacagtgaagaggaatggactcatctgtcacccaaaggggttgatccatct
actggagagttgctgtccatgcagcatcttcatctgaaggaagtggagtcctgtgagcag
gtatccattggactgagggaggcagctgagtaccctcaccttccacaggacgctgaacct
cggctgatagaagccctttctcagatgttgtccatgggtttccatgatgacgaaggctgg
ttgacccggcttctgcaagccaagcagtgtgacatcggtgcagctctcgatgcaatgcag
cccgcaaagggatcggctcaccagtga
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