Hemitrygon akajei (red stingray): 140739118
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Entry
140739118 CDS
T11019
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04010
MAPK signaling pathway
haka04020
Calcium signaling pathway
haka04510
Focal adhesion
haka04518
Integrin signaling
haka04540
Gap junction
haka04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
140739118 (pdgfrb)
04020 Calcium signaling pathway
140739118 (pdgfrb)
09133 Signaling molecules and interaction
04518 Integrin signaling
140739118 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
140739118 (pdgfrb)
04540 Gap junction
140739118 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
140739118 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
haka01001
]
140739118 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
haka04090
]
140739118 (pdgfrb)
Enzymes [BR:
haka01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
140739118 (pdgfrb)
Protein kinases [BR:
haka01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
140739118 (pdgfrb)
CD molecules [BR:
haka04090
]
Proteins
140739118 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_PDGFR_d4
Ig_3
I-set
Ig_2
ig
V-set
VEGFR-1-like_Ig-like
Ig_CD22
Motif
Other DBs
NCBI-GeneID:
140739118
NCBI-ProteinID:
XP_072923185
LinkDB
All DBs
Position
15:complement(4879985..5023430)
Genome browser
AA seq
1224 aa
AA seq
DB search
MSTVRWDLLLAGFLLTCSLAENSRGRMEIQDVILTPSSNTTLNCTSSGPVAWFYDKVANV
HTDGNVLHIYNAASYHNREYVCSANKTEILHFFIFVPDPNEWFRPQTQQEMFIMAEESVD
VFIPCVATNPELQVTLYHVETETTIDTPYDRRQGFLGKFKGGTYKCRAKLGKKEQVSDEY
VVETIQVSENLVVKLHALRTLVKKDELISVTCSANIELLEFSWSYPRAKDAVMRVTEGSQ
EVNSTLELEKATLGDTGWYNCSIKGYYPDQSEHKSLHITVLDKGFIDLRTELSEVEYAEL
SEVKMFAVNITAYPAPTVRWLKNNVPFNERTNQVTFSNKSLGENRYQCTLNLIRVKEEDF
GNYSIQVWNEDDKKELTFTLSVNVPARILDLSDYLHSNGLQTVTCITEGSPLPEITWHTC
QNLKRCNSKDRKWTPLKGNGSSVWVEKHVPERRANQVYRVRSVLTQDSGSGIAAVRCSAN
NGFGSVNREVKLVSNGPQSQLVTVATILVLLVIIIISLVVLMVIWRKKPRYEIRWKVIES
VSSDGHEYIYVDPTQLPYDSSWEFPRSQLSLGRTLGSGAFGRVSFRALISIDFSVLDLSG
RTLGSGAFGRVAFQALISIDFSVLDLSGRTLGSGAFGRVAFQALINIDFSVLDLSGRTLG
SGAFGRVAFRALISIDFSVLDLSGRTLGSGAFGRVAFQALINIDFSVLDLSGRTLGSGAF
GRVAFRALISIDFSVLDLSGRTLGSGAFGRVVEATAQGLSQSDSIMKVAVKMLKTTARTS
EKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEYCRHGDLVDYLYRNKHSFLQF
HGEAARTPSTGTSDNMKFERMKSYVALSFDSDGGYMDMNKEDRLDYTPMLQARPPPAYAQ
IAHSDYDGPYLQENYTPTEQEVPELRPLISDSPVLSFADLVGISYQVAHGMEFLSLRNCV
HRDLAARNVLICEGKLAKICDFGLARDIVNDSNYISRGSTFLPLKWMAPESIFNNLYTTL
SDVWSYAVLLWEIFTLGGTPYPELPVNDQFYNAIRSGYRMPKPHYATDEIYAIMKKCWND
EFEKRPSFSSLVTSMGNLLSESYKKRYVQVSQEFMKGDHPALRRTRTSTRGANDSVIYSN
CLHLDGTDNGYIIPLPDPVTPEERADAGDPAEEPSSVPAAGTRPSSLVCGESQEPSSLCD
LPQMTEDCRQLEMDIEAEVEDSFL
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgtccgttgggatctcctccttgcaggattcctccttacgtgctcacttgcc
gagaattccagaggccgcatggaaattcaggacgtcattctgactccttcctccaacact
accctgaactgcacttccagtgggcccgtggcctggttctacgacaaggtggcgaatgtt
cacactgacggcaacgtcctgcacatctacaatgcggccagttatcacaacagggagtac
gtctgctcggcaaataaaaccgagattctgcacttcttcatttttgtgccagatcccaat
gagtggttccgaccacagacccagcaggagatgttcatcatggctgaggagtccgtggac
gtgttcattccctgtgtggcaaccaatccagaactgcaggtcaccctctaccacgtggag
accgagaccaccatcgacaccccctatgacaggcgacaggggttcctcggcaagttcaaa
ggtggaacctacaagtgccgggctaagttagggaaaaaggaacaggtgtctgatgaatac
gttgtggaaacaattcaagtttctgagaaccttgtggttaaacttcatgccttgcggact
ttagtgaagaaggacgagttaataagtgtcacctgctctgcaaatatcgagctgctggaa
ttttcctggtcttacccgagggcaaaggatgctgtgatgagggtcacagaagggagccag
gaagtgaactcaacactcgagttggaaaaggcgacactgggggacaccggatggtacaac
tgcagcatcaagggctattaccccgatcagtcagaacacaaatctcttcacattactgtg
ctggacaaaggattcatcgatctgaggacagagctgtccgaggtggagtacgcagagttg
tccgaggtgaagatgtttgccgtcaacatcacggcgtacccagctcccaccgtcaggtgg
ctgaagaacaacgtgcccttcaatgaaaggaccaaccaagtgaccttcagcaacaagtcc
ctgggagaaaacaggtatcagtgtaccctcaatctcatccgagtgaaggaggaagacttt
gggaattacagcatccaggtctggaatgaggatgacaagaaagaattgaccttcaccctg
agcgtaaatgtgccagcaagaatcttggatcttagtgactatctacatagcaatggcctc
cagaccgtgacttgcattaccgagggctcgcctttgccggaaatcacctggcacacatgc
cagaacctaaagaggtgtaacagcaaggacaggaagtggacaccactgaaagggaacggc
agtagcgtctgggtggagaagcacgtccccgagcggcgagccaaccaggtctaccgggtc
cggagtgtcctgacccaggatagtggcagtggcatcgccgccgtgcgctgctccgccaac
aatggcttcggcagcgttaaccgcgaggtcaagctggtctccaacggcccgcagtctcag
ctggtcaccgtggcaaccatcctggtgctgttggtgatcatcatcatctcgctggtggtt
ctgatggtgatttggaggaagaaacctcgctatgaaatccgttggaaggtcattgagtca
gtcagttcggatggacatgagtatatttacgttgatcccacccaactgccatacgactcc
agttgggagtttccgagaagccagctttccctgggaaggacgctcggatcaggggcgttt
ggccgggtgtcgttccgagctctaatcagcattgactttagtgtgttggatctttcagga
aggacactcggatcaggggcgtttggccgggtggcgttccaagctctaatcagcattgac
tttagtgtgttggatctttcaggaaggacgctcggatcaggggcgtttggccgggtggcg
ttccaagctctaatcaacattgactttagtgtgttggatctttcaggaaggacgctcgga
tcaggggcgtttggccgggtggcgttccgagctctaatcagcattgactttagtgtgttg
gatctttcaggaaggacgctcggatcaggggcgtttggccgggtggcgttccaagctcta
atcaacattgactttagtgtgttggatctttcaggaaggacgctcggatcaggggcgttt
ggccgggtggcgttccgagctctaatcagcattgactttagtgtgttggatctttcagga
aggacgctcggatcaggggcgtttggccgggtggtggaagccacagctcagggattgagt
cagtccgattccatcatgaaggttgctgtgaagatgttgaagactactgccaggaccagt
gagaaacaagctttgatgtccgagttgaaaatcatgagccaccttggacctcacctcaac
atcgtcaacctgttgggcgcctgtaccaaaggaggacccatctacatcatcaccgagtac
tgtcgccatggcgacttggtggactacctgtaccgcaacaagcacagcttcctacagttc
catggtgaggcagcacggacaccctcaaccgggacctccgacaacatgaaattcgagagg
atgaagagttacgtggctctctccttcgacagtgacgggggttatatggacatgaacaag
gaggatcggctggactacacccccatgctgcaggcccgacccccacctgcctacgcacag
atcgcccactctgactacgatggaccctacctgcaagagaattacacccccaccgagcag
gaagtaccggaactcaggccgctgatcagtgactcgccggtcctcagcttcgcagacctg
gtcggaatcagttaccaggtggcacacggaatggagttcctctcactccgaaactgtgtc
catcgagatctagcagcaaggaacgtcctcatctgtgaagggaaactggcaaagatctgc
gactttgggctggctcgggacatagtgaacgattccaattatatttcaagaggaagtacc
tttttgcctctgaagtggatggcaccggagagtatcttcaacaacctgtacaccacgctg
agtgacgtctggtcctacgctgtgctcctgtgggagatcttcacactcggtgggacccct
tacccagagctgccggtcaacgatcagttctacaacgccatcaggagtgggtaccgaatg
cccaaacctcactacgccaccgacgaaatatacgccatcatgaagaagtgctggaacgat
gagtttgagaagaggccctccttctccagcttggtcacgtccatggggaacttgctctct
gagagctacaaaaagagatacgttcaggttagccaggagttcatgaagggcgatcaccca
gccctgcgccgcaccaggaccagcacccgcggagccaacgacagcgtcatctactccaac
tgcctacacctcgatgggacggacaacggctacatcatcccgctgcccgacccagtaacc
cccgaggagagagcggacgccggcgatccagcagaggagccctcgagcgtgccagctgct
gggacaaggccaagctcccttgtctgtggcgagagccaggagccgagcagtttgtgtgat
cttcctcagatgactgaagactgcagacaacttgagatggacattgaagctgaggtggag
gacagcttcctgtga
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integrated database retrieval system
