Halorubrum sp. BOL3-1: EKH57_12250 Help Entry EKH57_12250       CDS       T05834                                  Symbol ligA Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism halb  Halorubrum sp. BOL3-1 Pathway halb03030   DNA replication halb03410   Base excision repair halb03420   Nucleotide excision repair halb03430   Mismatch repair Brite KEGG Orthology (KO) [BR:halb00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     EKH57_12250 (ligA)    03410 Base excision repair     EKH57_12250 (ligA)    03420 Nucleotide excision repair     EKH57_12250 (ligA)    03430 Mismatch repair     EKH57_12250 (ligA)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:halb03032]     EKH57_12250 (ligA)    03400 DNA repair and recombination proteins [BR:halb03400]     EKH57_12250 (ligA) Enzymes [BR:halb01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      EKH57_12250 (ligA) DNA replication proteins [BR:halb03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      EKH57_12250 (ligA) DNA repair and recombination proteins [BR:halb03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      EKH57_12250 (ligA)    NER (nucleotide excision repair)     GGR (global genome repair) factors      EKH57_12250 (ligA)    MMR (mismatch excision repair)     DNA ligase      EKH57_12250 (ligA)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       EKH57_12250 (ligA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT HHH DNA_ligase_ZBD 5_3_exonuc RUBY_RBDX TetR_C_6 Motif Other DBs NCBI-ProteinID:  QAU13419 UniProt:  A0A410TRG8 LinkDB All DBs Position 2348147..2350330 Genome browser AA seq 727 aa AA seqDB search MTTSSTRYADPDGNPYVENPPTDFEPVESLDPAAAAEQADRLRAAVREHDHRYYVKADPL ISDEAYDALFARLTGLEDAFDLSTENSPTRRVGGEPLDELETVEHVAPMLSIDNSTDAEA VREFDQRVREGLEAAAESGDLPAFDPADLAYVCEPKFDGLSIEVVYEDGAYVRAATRGDG IEGDDVTEQVRTVPSVPGQLRGDDHPDRLAVRGEVYMPRDAFEAYNEELTERGEEPFANP RNAAAGTLRQLDPGVVAERPLDVFFFDALAWESGDDGPDASDRLDASSRPARHSDVLDAF ESFGLPRNGRVAVVDGVEAAIDYRDEILAARDGLNYAVDGVVVKVDALAHRDALGATSRA PRWAFAHKFPPRTATTTVEGVTVQVGRTGRLTPVAELDPVDIGGVTVSRATLHNPAEIES LGANAGDRVRIYRAGDVIPYVPEVVEKRSEGTYAFPEACPVCGADVERDGPLAFCTGGLG CPAQLERAVEHWARRDALDVEGLGPERVEQLREAGLVESLPDLYELTVEDLTALEGWGET SAENLIAELDATRNPPFDDFLAGLGIPDVGATTARELAAHFGTLDALLDADEAALREVDD VGPEVAASIRTFFDRDENRAAIDGLRERGVDPEPVETADGDALDGLTFVFTGSLSVSRSE AQAHVEAHGAAVTAAVSGNTDYLVAGESPGRSKRDDADAEDVPVVDEAAFADLLADRGVD WPPGDDE NT seq 2184 nt NT seq  +upstreamnt  +downstreamnt atgacgacctcgtcgacccggtacgcggacccggacgggaacccgtacgtcgagaacccg ccgaccgacttcgagccggtcgagtcgctcgaccccgcggcggcggccgagcaggcggac cggctccgggcggcggtccgcgagcacgaccaccggtactacgtgaaggccgacccgctg atctcggacgaggcgtacgacgccctgttcgctcgactgacgggactggaagacgcgttc gacctctcgacggagaactccccgacgcggcgggtcggcggcgaaccgctcgacgagttg gagacggtcgaacacgtcgcgccgatgctgtcgatcgacaactcgaccgacgccgaggcc gtccgcgagttcgaccagcgcgtccgcgaggggttggaggccgcggccgagtcgggcgac ctccccgcgttcgaccccgcggacctcgcgtacgtctgcgagccgaagttcgacggcctc tcgatcgaggtggtttacgaggacggcgcgtacgtccgtgccgccacccgcggcgacggg atcgagggcgacgacgtcaccgagcaggtccggacggtcccctccgtgcccggccaactt cggggcgacgaccacccggaccggctcgcggtccgcggggaggtgtacatgccccgcgac gcgttcgaggcgtacaacgaggagctgacggagcgcggcgaggagccgttcgcgaacccc cgcaacgccgccgccggcaccctccgacagctcgatccgggagtcgtcgcggagcgcccg ctcgacgtcttcttcttcgacgcgctcgcgtgggagtcgggcgacgacggtccggacgcc tcggatcgtctcgacgcttcctcccggcccgcccgccacagcgatgtcctcgacgccttc gagtcgttcggactcccccggaacggtcgggtcgcggtcgtcgacggcgtcgaggccgcg atcgactaccgcgacgagatcctcgccgcccgcgacggcctgaactacgcggtcgacggc gtcgtggtcaaggtcgacgcgctcgctcaccgcgacgcgctcggagccacatcgcgcgca ccgcgctgggcgttcgcgcacaagttcccgccgcggaccgcgacgacgaccgtcgaggga gtcacggttcaggtgggacggaccggccgactcacccctgtggccgaactcgaccccgtc gacatcggcggcgtcaccgtctcccgcgcgacgctgcacaaccccgccgagatcgagtcg ctcggggcgaacgccggggaccgcgtccggatctaccgcgcgggcgacgtgatcccctac gtccccgaggtcgtcgagaagcgttccgaggggacctacgcgttccccgaggcgtgtccc gtctgcggggcagacgtcgagcgcgacggcccgctcgccttctgtaccggcgggctcggc tgcccggcgcagctggagcgagcggtcgaacactgggcgcgccgcgacgcgctcgacgtc gagggactgggtccggaacgggtcgaacagctccgcgaggccggcctcgtcgagtcgctg ccggacctgtacgagctgaccgtcgaggacctgaccgcgttagaggggtggggggagacg agcgccgaaaacctgatcgccgaattagacgcgacccggaacccgccgttcgacgacttc ctcgccggtctcgggatccccgacgtcggcgcgacgaccgcccgggagctcgccgcacac ttcgggacgctcgacgccctcctcgacgcggacgaggcggccctccgcgaggtcgacgac gtcggcccggaggtggcagcgtcgatccggaccttctttgatcgcgacgagaaccgcgcc gcgatcgacgggctccgcgagcgcggcgtcgaccccgagccggtcgagaccgccgacggc gacgcgctcgacggactcaccttcgtgttcaccggatcgctgtcggtctcgcggagcgag gcacaggcgcacgtcgaggcgcacggcgcggccgtgaccgccgccgtctccgggaacaca gactacctcgtcgcgggcgaaagtccgggacggtcgaagcgcgacgacgccgacgccgag gacgtaccggtcgtcgacgaggccgcgttcgcggacctgctcgccgaccgcggcgtcgac tggccgccgggcgacgacgagtga

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