Haliaeetus albicilla (white-tailed eagle): 104311658
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Entry
104311658 CDS
T08398
Symbol
DDX58
Name
(RefSeq) probable ATP-dependent RNA helicase DDX58 isoform X1
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
hald
Haliaeetus albicilla (white-tailed eagle)
Pathway
hald04622
RIG-I-like receptor signaling pathway
hald04623
Cytosolic DNA-sensing pathway
hald05164
Influenza A
hald05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hald00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
104311658 (DDX58)
04623 Cytosolic DNA-sensing pathway
104311658 (DDX58)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104311658 (DDX58)
05168 Herpes simplex virus 1 infection
104311658 (DDX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
hald04054
]
104311658 (DDX58)
Enzymes [BR:
hald01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104311658 (DDX58)
Pattern recognition receptors [BR:
hald04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
104311658 (DDX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C
DEAD
ResIII
Helicase_C
AAA_19
AAA_25
Motif
Other DBs
NCBI-GeneID:
104311658
NCBI-ProteinID:
XP_009929288
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MPSNLHKILVWCVCPVKRLVCQRMLRVDCKDSTSILLNSNCVGHNIFYAFLLQYSSKKHG
SLLEGIYQSSRVYEPKKAWSYQTELAQPAINGKNTLICAPTGSGKTFVAILICEHHFQNM
PLGQKAKVVFLATKVPVYEQQKTVFKQHFERSGYSVQGISGETVANVSVEKVIQDSDIIV
LTPQILVNSIEEGILGSLSIFTLMIFDECHNTTGNHPYNVLMSRYLEQKFDSASQLPQIV
GLTASVGVGNAKSTKETIEHICTLCSYLDIQAISTVRENKQDLQRFTNKPETHVRWVKMR
DQNHFADIISGLMSETEALMRRIYSVDTISQINRNDFGTQKYEHWIVATQKKCRLLQLAD
KEKESSICRHLFICTEHLRKFNDALIISEDARIEDALAYLTEFFTNVKNGPYTELEKKLT
AKFQEKEPELTALSKDESNENPKLEELACILEEAYRYNPDTHTLLFAKTRALVAALKKWI
EANPLLSYIKPGVLMGRGRRDQKTGMTLPMQKGVLDAFKTNKENRLLIATSVADEGIDIS
ECNLVVLYEYFGNVTKMIQVRGRGRAKDSKCILVTSKTEVVENEKHNRYKEEMMNEAIEK
LQSWDETTFARKVCTSVEFSYANLQA
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgccatcaaacctacacaaaattcttgtctggtgcgtatgtcctgttaaaaggcttgtc
tgtcagagaatgctccgtgtagactgcaaggactctacctctatccttttaaatagcaac
tgtgtggggcacaatatattttatgcatttctgttgcaatactcgtcaaaaaaacatggt
tctctcctagaaggcatctatcagtcttcacgtgtttatgaaccaaagaaggcttggagc
taccagactgaacttgcacagcctgctatcaatgggaaaaacacattgatatgtgcccct
acaggatctggaaaaacctttgtggcaattctgatttgtgaacaccatttccaaaacatg
cccttaggacaaaaggcgaaagttgtctttcttgcaaccaaagtgccagtgtacgaacaa
cagaaaactgtattcaagcagcattttgaaagaagtggatattctgttcaaggaattagt
ggtgaaacagttgcaaatgtctccgtagaaaaggttatacaggacagtgacatcattgtg
ctaacaccccagattcttgtgaatagcatcgaggaagggatccttggctccctctccatc
ttcactctgatgatatttgatgaatgccacaacactactggcaatcacccttacaatgtg
ttaatgagtagatacctggaacaaaaatttgactctgcaagccagctgcctcagattgta
ggtttaactgcttctgttggagttggtaatgccaagagcaccaaggaaacgatagagcac
atctgtaccctctgctcctaccttgacatacaggccatatccactgtcagagagaacaaa
caggatctgcagagatttacaaacaagccagaaacacatgtcagatgggttaaaatgcga
gatcagaatcactttgcagacattatctcaggtctgatgtctgagacagaggcgttgatg
aggaggatttactcagtggacactatctcccaaatcaacaggaatgattttggaacacag
aaatatgaacactggatagttgccactcagaagaaatgcaggctgttgcaactggcagat
aaggagaaggagagcagcatttgtagacaccttttcatttgcactgaacacctgcggaaa
ttcaacgatgctcttatcatcagtgaagatgcccgcattgaagatgctttagcctaccta
actgaatttttcacaaatgtcaaaaatggaccatatacagagttagagaagaaactgaca
gccaaatttcaagagaaagaaccagaactgactgccctttcaaaagatgagtcaaatgag
aatcctaagctggaagagcttgcttgcatcctggaggaagcataccgctataacccagac
actcacactcttctctttgctaagacaagagccttagtagctgctttgaagaagtggata
gaagcaaaccctctacttagctacataaagccaggtgtgttgatgggtcgtggaagaaga
gatcaaaaaacaggtatgaccctcccaatgcagaagggtgtgctggatgcattcaaaacc
aacaaagagaacagactgctaattgctacatccgttgctgatgaaggcattgatatttct
gagtgcaaccttgttgtgctctatgaatacttcggtaatgtcaccaaaatgatccaagtc
agaggtcgtggaagggcaaaagacagcaagtgcatccttgtgacaagcaaaacagaagtg
gttgagaatgagaaacacaaccgttacaaggaagaaatgatgaatgaagctattgaaaag
ctacagagttgggatgaaacaacatttgcaagaaaggtttgtacttctgtggaattttca
tacgcaaatctacaggcgtaa
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