Haloarcula sp. JP-L23: G9465_08875
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Entry
G9465_08875 CDS
T06489
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
halj
Haloarcula sp. JP-L23
Pathway
halj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
halj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G9465_08875 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halj03400
]
G9465_08875 (nth)
Enzymes [BR:
halj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
G9465_08875 (nth)
DNA repair and recombination proteins [BR:
halj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
G9465_08875 (nth)
Prokaryotic type
G9465_08875 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
RecR_HhH
IMS_HHH
DinI
HHH_8
Ribosomal_S13
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
QIO22452
LinkDB
All DBs
Position
complement(1736437..1737123)
Genome browser
AA seq
228 aa
AA seq
DB search
MGTPLASREAQAEEVVERLHEEYPDSTISLNYSNRLELLVAVVLSAQCTDERVNEVTEDL
FEKYRTPEDYAAASEDELADDIYGITFHNNKGGYLKGIGETIVAEHDGEVPDTMTALTDL
PGVGRKTANVVLQHGHDVVEGIVVDTHVQRLSRRLGLTEKERPEAIEQDLLDVVPESEWQ
QFTHLLIDHGRAVCGARSAECDECVLADICPSEKGDSDVDLASGEAWN
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgggaacaccgctggcgagtcgcgaggcacaggccgaggaagtcgtcgagcgactccac
gaggagtaccccgactcgactatctcgctgaattactcgaaccggttggaactgctcgtc
gccgtcgtcctctcggcacagtgtaccgacgagcgagtgaacgaggtcacggaagacctc
ttcgagaagtaccggaccccggaggactacgccgcggcaagcgaggacgaactggccgac
gacatctacggcatcacgttccacaacaacaagggcggctacctgaaaggcatcggcgag
acgatcgtcgccgaacacgacggcgaggtccccgacacgatgacggcgctgaccgacctg
ccgggcgtcggccgcaagacggccaacgtcgtcttgcaacacggccacgacgtcgtcgag
ggcatcgtcgtcgacacgcacgtccagcggctttcgcgccgtctcggtctgaccgaaaaa
gagcggcccgaagccatcgagcaggacttactcgacgtggtgcccgagtcggagtggcag
cagttcacccacctgctcatcgaccacgggcgagcggtgtgtggcgctcggtctgccgag
tgtgatgagtgcgtgctggccgacatctgcccctcggagaagggcgacagcgacgtcgac
ctcgcctctggcgaggcgtggaactag
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integrated database retrieval system
