Halomicrobium sp. LC1Hm: LC1Hm_2020
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Entry
LC1Hm_2020 CDS
T06261
Symbol
rpoF
Name
(GenBank) DNA-directed RNA polymerase subunit F
KO
K03051
DNA-directed RNA polymerase subunit F [EC:
2.7.7.6
]
Organism
hall
Halomicrobium sp. LC1Hm
Pathway
hall03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LC1Hm_2020 (rpoF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hall03021
]
LC1Hm_2020 (rpoF)
Enzymes [BR:
hall01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LC1Hm_2020 (rpoF)
Transcription machinery [BR:
hall03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
LC1Hm_2020 (rpoF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb4
RPAP3_C
Motif
Other DBs
NCBI-ProteinID:
QGA83057
UniProt:
A0A5Q0UN89
LinkDB
All DBs
Position
complement(1864388..1864744)
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AA seq
118 aa
AA seq
DB search
MTIFKEKVDEEYLTIAETKEILEDIEAERSMDEDREMRYELARAIEHVNRFAMLDPDEAD
EFVDQLRDLEKIDEATAYKIANLRPLDRDELRSVFAQERYSLSGDELDEILNVVKQYA
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcttcaaagagaaggtcgacgaggagtacctcacgatcgccgaaacgaaggag
atcctcgaagacatcgaagccgagcgctcgatggacgaggatcgagagatgcgttacgag
ctcgctcgtgcgatcgagcacgtcaaccgattcgcgatgctcgatcccgacgaggccgac
gagttcgtcgaccagctacgggacctggagaagatcgacgaggcgaccgcctacaagatc
gcgaacctccgaccgctggatcgcgacgagctgcgctccgtgttcgcacaggagcggtac
tcgctgtcgggcgacgaactcgacgagattctcaacgtcgtcaagcagtacgcgtga
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