Haloprofundus sp. MHR1: FCF25_11225
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Entry
FCF25_11225 CDS
T05952
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
halm
Haloprofundus sp. MHR1
Pathway
halm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
halm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FCF25_11225 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halm03400
]
FCF25_11225 (nth)
Enzymes [BR:
halm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FCF25_11225 (nth)
DNA repair and recombination proteins [BR:
halm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FCF25_11225 (nth)
Prokaryotic type
FCF25_11225 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Noelin-1
HHH_5
HHH_8
Ogg-HhH
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QCJ47655
UniProt:
A0A4D7H6M1
LinkDB
All DBs
Position
complement(2218277..2218960)
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AA seq
227 aa
AA seq
DB search
MGEPLPSREEQALEVLDRLYDEYPDTTISLNFSNRLELLIAVMLSAQCTDERVNKVTADL
FETYRTPEEYANAPQEEMAEAISSITYYNNKAKYIRSAAADIVEKHGGEVPDTMDELTEL
AGVGRKTANVVLQHGHDVVEGIVVDTHVQRISRRLGLTEEEYPERIEEDLMPVVPEEDWQ
QYTHLLISHGRAVCTARNPTCSDCVLEDVCPSSKLDHEVDLASGDAW
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgggagagccactgccgtcgcgcgaggagcaggcgttggaagtcctcgaccgcctgtac
gacgagtaccccgacaccacgatttcgctgaacttctcgaaccgcctcgaactgctcatc
gccgtgatgctgtcggcgcagtgcaccgacgagcgcgtcaacaaggtgaccgccgacctc
ttcgagacgtaccgcacgcccgaggagtacgcgaacgcgccgcaggaggagatggccgag
gccatctcgtctatcacctactacaacaacaaggcgaagtacatccgctcggcggccgcc
gacatcgtcgagaaacacggcggcgaggtgcccgacacgatggacgaactcacggagttg
gcgggcgtcggtcggaaaacggcgaacgtcgtgctccagcacggccacgacgtcgtcgag
ggtatcgtcgtcgacacgcacgtccagcgcatcagccgccgactcggcctcaccgaggag
gagtatcccgagcgaatcgaggaggacctgatgcccgtcgtccccgaggaggactggcag
cagtacacccacctgctcatcagccacggccgagcggtctgtacggcccgcaacccgacg
tgttcggactgcgtgctcgaagacgtctgcccctcctcgaaactcgaccacgaggtcgac
ctcgccagcggcgacgcgtggtga
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integrated database retrieval system