Halomonas sp. 1513: BWR19_12620 Help Entry BWR19_12620       CDS       T04761                                  Name (GenBank) DNA ligase B   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism halo  Halomonas sp. 1513 Pathway halo03030   DNA replication halo03410   Base excision repair halo03420   Nucleotide excision repair halo03430   Mismatch repair Brite KEGG Orthology (KO) [BR:halo00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     BWR19_12620    03410 Base excision repair     BWR19_12620    03420 Nucleotide excision repair     BWR19_12620    03430 Mismatch repair     BWR19_12620  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:halo03032]     BWR19_12620    03400 DNA repair and recombination proteins [BR:halo03400]     BWR19_12620 Enzymes [BR:halo01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      BWR19_12620 DNA replication proteins [BR:halo03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      BWR19_12620 DNA repair and recombination proteins [BR:halo03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      BWR19_12620    NER (nucleotide excision repair)     GGR (global genome repair) factors      BWR19_12620    MMR (mismatch excision repair)     DNA ligase      BWR19_12620   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       BWR19_12620 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  OB_DNA_ligase DNA_ligase_aden HHH_5 RNA_ligase Motif Other DBs NCBI-ProteinID:  APX93711 LinkDB All DBs Position 2782918..2784636 Genome browser AA seq 572 aa AA seqDB search MYTDSTLGRGRPRRRLQLLIFALLSSLAWPLLADQCRPIDEASRAQLEARLAEWDAAYYQ RGERLVDDSLYDQTRQRLAQWKACSGESSAVTAHEPDGPLDHPVVQTGLAKLDDRDAVAR WMQRRREHSLWVQPKVDGVAVTLVYDDGQLAQAISRGDGERGSDWLAHLRRAPHVTQRLT APYPPRVVLQGELYLRLEQHIQAEHGSAGARSAIIGLMARHAWQTEDAERVGLFVWDWPD GPADMQQRLDRLAAWGFGDSVAMTQAVTQADEVAAWRQRWYRGALPFATDGVVVRQSQRP APHTWQPAPPAWAAAWKHPAQQALAEVRGVEFRVGRTGQITPVLQLYPTALDDRTIRRVS LGSLNQWQQHDIRPGDHVTIRLAGLTIPQFEAVLTHRQPRPPLEIPDPEAFHPLSCLRLT PGCESQFLARLTWLSGPDGLDMAGLGEGSWQRLINAGLLEDLLDWRDLSPTQLQQAHGVG EVRAAQWHALFAESAEQTLPRWLAALGMPRVAPTALQDAHGEVTLAELRQRSAADWRARA GIGEINAERLVAFFSDPRITAWLDSLVDSAEG NT seq 1719 nt NT seq  +upstreamnt  +downstreamnt atgtacaccgactcgacccttggtagagggcgaccgcggcgccgcctgcagctacttatc ttcgctctcctgagcagcctcgcctggccactgctggccgaccagtgccgtcccatcgac gaggctagccgcgcccaactggaggcacggctggccgagtgggacgcggcctattatcag cgcggcgagcggctggtcgacgatagcctctacgaccagacccgccagcggctggcacag tggaaggcctgcagcggagagtcatccgccgtcacggcacatgaacccgacgggccgctc gaccacccggtggtgcagaccggcctggccaagctcgacgaccgcgacgccgtggcgcgc tggatgcagcgccgccgggaacattcactgtgggtgcagccaaaggtcgacggcgtcgcc gtgacgctggtctatgacgatggccagctggcccaggcgatcagccgcggcgacggcgag cgcggcagcgactggctggcgcatctgcgccgggcgccccacgtcacccagcggctgact gcgccttacccgccccgcgtggtgctgcagggcgagctctatctgcgcctcgagcagcac atccaggccgagcacggcagcgccggggcacgcagcgccatcatcggcctgatggcgcgc cacgcctggcaaacagaggatgccgagcgggttggcctgttcgtctgggactggccggac ggcccagccgacatgcaacagcgcctcgaccggctcgccgcctggggctttggcgatagc gtggcgatgacccaggccgtgacgcaggccgatgaggtggccgcctggcgccagcgctgg tatcgcggcgccctgcccttcgccaccgacggcgtggtggtgaggcagagccagcggccc gccccgcacacctggcagccggcaccgccggcctgggcggcggcctggaaacatcccgcc cagcaggcgctggccgaggtccgcggcgtcgagttccgggtcggccgcaccgggcagatc accccggtgctgcagctctaccccaccgccctcgacgaccgcacgatacgccgcgtcagc cttggctcgctgaaccagtggcagcagcacgacatccgacccggcgaccacgtcacgatt cggctcgccggactgaccattcctcaattcgaggccgtgctgacccaccgccagccgcgc ccgcccctggagatccccgaccccgaggcatttcaccccctcagctgcctgcgtctgacg cccggctgcgagagccagtttctggcccggctgacgtggctctccgggccggacgggctg gacatggccggcctcggcgaaggcagctggcagcgcctgatcaacgcagggctactcgag gatctgctcgactggcgcgacctcagcccgactcagctgcagcaggcccacggcgtcggc gaggtgcgcgccgcgcagtggcacgccctgtttgccgagagcgccgagcagacgctgcct cgctggctggcggcactggggatgcccagggtcgcgccaacggcattacaagacgcccat ggcgaggtcacactggccgaactgcgtcagcgctccgcggccgactggcgcgcccgggca ggcatcggcgagatcaacgccgagcggctggtggcgttcttcagcgatccacgcatcacc gcctggctcgactccctggtcgactcagccgagggctga

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