Halorubrum sp. CBA1229: Hrr1229_001785
Help
Entry
Hrr1229_001785 CDS
T06658
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
halq
Halorubrum sp. CBA1229
Pathway
halq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
halq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Hrr1229_001785 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halq03400
]
Hrr1229_001785 (nth)
Enzymes [BR:
halq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Hrr1229_001785 (nth)
DNA repair and recombination proteins [BR:
halq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Hrr1229_001785 (nth)
Prokaryotic type
Hrr1229_001785 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
EndIII_4Fe-2S
Ogg-HhH
DUF7018
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
QKY15664
UniProt:
A0A7D5BYV4
LinkDB
All DBs
Position
355464..356147
Genome browser
AA seq
227 aa
AA seq
DB search
MGTPLEPREEQVAEVLDRLYEEYPDSTISLNYSNRLELLIAVILSAQCTDERVNAVCADL
FETYETPEEYANAPQEELAEAINSITYYNNKAKYIRSACADIAEEHDGEVPDTMSELTDL
AGVGRKTANVVLQHGHDVVEGIVVDTHVQRLTRRLGITEEERPEAIEQDLLDVVPEADWQ
QFTHLMIDHGRATCTAINPDCADCALADICPSEKGDGGVDLASGEAW
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgccactggagccgcgtgaggaacaggtcgcggaggtcctcgaccggctgtac
gaggagtatccggactcgacgatctcgctgaactactcgaaccggttggagctgctcatc
gccgtgatcctctcggcgcagtgcaccgacgagcgcgtgaacgcggtgtgtgccgacctc
ttcgagacgtacgagacgcccgaggagtacgcgaacgcgccccaagaggagctcgccgag
gcgatcaactccatcacctactacaacaacaaggcgaagtacatccggtcggcgtgcgcg
gacatcgcggaggaacacgacggcgaggtgccggacacgatgtccgagctgacggatctg
gcgggcgtcgggcgcaagaccgccaacgtcgtcctccagcacggccacgacgtcgtcgag
gggatcgtcgtcgacacccacgtccagcggctcacccgccggctcggaatcacggaagag
gagcgcccagaggcgatcgagcaggacctcctcgacgtcgttcccgaagcggactggcag
cagttcacgcacctcatgatcgaccacgggcgcgccacgtgtaccgcgatcaacccggac
tgcgccgactgcgcgctcgcggacatctgtccctccgagaagggcgacggcggcgtcgac
ctcgcgagcggcgaggcgtggtaa
DBGET
integrated database retrieval system
