Halorubrum sp. CBA1229: Hrr1229_009540
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Entry
Hrr1229_009540 CDS
T06658
Name
(GenBank) RNA polymerase Rpb4 family protein
KO
K03051
DNA-directed RNA polymerase subunit F [EC:
2.7.7.6
]
Organism
halq
Halorubrum sp. CBA1229
Pathway
halq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
halq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Hrr1229_009540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halq03021
]
Hrr1229_009540
Enzymes [BR:
halq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Hrr1229_009540
Transcription machinery [BR:
halq03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Hrr1229_009540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb4
Motif
Other DBs
NCBI-ProteinID:
QKY17115
UniProt:
A0A7D4Y2P5
LinkDB
All DBs
Position
1920592..1920948
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AA seq
118 aa
AA seq
DB search
MTIFKEKVDEEYVTVSEAKEVLVDIEAERAEDEDRDLRYELARAIEHVNRFARLDADESR
ELVEELTELEQIDIPTAVKIADLLPEDRTELRSVFAQERYSLDGDELDDVLDVVAKYA
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcttcaaagagaaggtcgacgaggagtacgtcaccgtctccgaggcgaaggag
gtcctcgtggacatcgaggcggagcgcgccgaggacgaggaccgcgacctccgctacgag
ctcgcccgcgcgatcgagcacgtcaaccggttcgcccggctcgacgcagacgagtctcgc
gagctcgtcgaggagctgacggagctcgagcagatcgacatcccgaccgcggtgaagatc
gccgacctcctcccggaggaccgcaccgagctgcgctcggtattcgctcaggagcgctac
tcgctggacggcgacgagctcgacgacgtccttgacgtcgtcgcgaagtacgcctag
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