Halocella sp. SP3-1: D7D81_12705
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Entry
D7D81_12705 CDS
T05769
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hals
Halocella sp. SP3-1
Pathway
hals03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hals00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D7D81_12705 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hals03400
]
D7D81_12705 (nth)
Enzymes [BR:
hals01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
D7D81_12705 (nth)
DNA repair and recombination proteins [BR:
hals03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
D7D81_12705 (nth)
Prokaryotic type
D7D81_12705 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
Ogg-HhH
EndIII_4Fe-2S
HHH_5
RecR_HhH
DUF2400
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AZO95385
LinkDB
All DBs
Position
2639867..2640499
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AA seq
210 aa
AA seq
DB search
MNVRKVTKIIMLMEEKWPKPVTELNYSSPFELLLATILSAQSTDKQVNKVTKRLFKKYNQ
PGDFAEMKKDELAQEINSIGLYRNKSKFIIESSQLILKEFKGKVPDTRKELMRLPGVGRK
TANVILASAFQKNAIAVDTHVFRVANRLGLVKTDKVVEVEKQLMNIIPEEKWSDLHHWLI
FLGRRICKARNPHCNKCFLQDYCEYYNSSK
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcagaaaagttactaaaataattatgttaatggaagagaaatggccgaagcct
gtaacagaattaaattactcaagcccttttgaactcctgcttgctacgatattatctgct
cagtcaactgataaacaggtaaataaggtaacaaagagactctttaaaaagtataatcag
ccaggggattttgcggaaatgaaaaaggatgaactggctcaggaaatcaatagtattggt
ttatatcgcaataaaagtaaatttattattgaaagcagccagctgatcctgaaagaattt
aaaggtaaggtaccagatacaagaaaggaattaatgagattgccaggggttggacgtaaa
actgccaatgtaatcttggcctctgcctttcaaaaaaatgcaattgcggttgatacacat
gtctttagggtagcaaatcggttaggacttgttaagacagataaagtagtggaagttgaa
aaacaattaatgaatataatacctgaagaaaaatggagtgatctgcatcactggttaata
ttcctcggccgtaggatttgtaaagccagaaatccccattgtaacaaatgttttttacag
gactattgtgagtattataattcatctaaataa
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