Homarus americanus (American lobster): 121859072
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Entry
121859072 CDS
T07477
Name
(RefSeq) nuclear pore membrane glycoprotein 210-like isoform X1
KO
K14314
nuclear pore complex protein Nup210
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121859072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hame03019
]
121859072
Messenger RNA biogenesis [BR:
hame03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121859072
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_NUP210_2nd
Ig_NUP210_1st
Ig_NUP210_7th
Ig_NUP210_15th
Ig_NUP210_3rd
Ig_NUP210_9th
Ig_NUP210_4th
Ig_NUP210_6th
NUP210_Ig
Big_2
Big_1
Motif
Other DBs
NCBI-GeneID:
121859072
NCBI-ProteinID:
XP_042211673
LinkDB
All DBs
Position
Unknown
AA seq
1906 aa
AA seq
DB search
MVGAMMLSSPKTLHLCVLICCLLPLLASKLNVPRVLLPYNHEIPSNFTLKVFEGGCYQWS
CSRSEVVLLTEVIEDGCANEVQVSAISRSPSRQTAIILAQDSGSGGILRCDVLVDTIHRL
EIVTTTRELYVEEAPEEFEVRAYDDQGNEFTTLEGIEMIWDLQTLTDRGSVVAAQTVLKF
MTFDESPYEMPPSIAPLEESGRMGYMALIEGRQTGSARLSVRVAHPAYKHLAPSSVNLMV
VANLLLDPADVYVLPHTAVKYTVFQLKQGHLSTIDIPASQFYLQVADTEIAELNDDGVSI
TAKTLGTTQVILKDNNVISSELVKQPTANIHVVDPSYLIISIEPHNNPALILGRRYAFIV
NVYDKQDNKIFLADNIVMETTVPSEHFASEYVSRNGSYVYGVTIKTGKTKVQATLTAIEV
GDTILEITPPLKASQEISIFDPIAVIPQRTVLPWDPVTKPVYSLNLTVVGGSGSVLWSSS
NTEVVGVSQMGVCRTKAYGSVSVTAAMVLNPHNKDAAEIHIVEAIGLALLESVVEVEVEE
KLPLHVASYTQWGDTKVPFTVCHQLPLKVEPLELTFIALPDVKTPIVKGSCATLEVVGKT
PGFSEVKVSYKSSKGELAASTMVAAFRPLRPTNPSSGKTVLALGSSRVVLFEGGPLPWIN
KRSTHTAKAQVDDPEKVGVQLLDEVKQSDVHAIEVVCHDLGEFTLTLTVGNSPVPTLPHP
RSVSSTLSVVCALPDAISLAAIIKRPVAAVSPCPAVAEIGVSVAHCYKPLSMEVIVTDSE
NLKFDNISSLVLKWNLSDETLASIPAEPSSLTQVSTVQGFSLPIKTKQMLKPTGEVGEVL
VSVMLTGFNKFVSEAARQHPLPSLSASLPLKLVQDAVLEPSSAVLYQHEDNKLELTVAGG
SGFFELQTAENDVASLAYMDKERIVTVQPISDGELTVTLVDVCLEAENPATSHIRIASIA
SLDLVIVDRVELGGVLEAEVLAKDSLGHPLPAHNLMHLTPHPQANIITARYQGVNSEGNA
VYEVTGRHVGDTTLRVSAGNGGIGEALIYSPAKPIQVFPPLVLHPRNITLIIGAVYQVET
KGGPYPDAVVEYSMVNETIASTSHAGIVTALSLGTTVLMAQAVSVSIETGRKISYSRDVV
IINVIPLEKIRIHAPLTHLETGTTMPLYALGSEDYQNPLAYATAVPPLLFEWSINNKQIA
SFIGIYRKNGLLETKENNGIVRVRAERPGRVSVTLKVKPRVPANHPHFQIIDNVILTDKL
EIKVFESLKLKYPDDGSSHLLLSPHAEAKITTNRDGDGQLSYKIERCDEGEGKKQGVITV
SPDGMVKSGGITGEATVVVTIKEKCGISQSLAVLVEVKDISYMQAEVGAVMSVSPGESVS
VMPLGSSLQLTLSYHDNRGRVFHATNAQPTFRPSRFDLVGVSYGNTNNSLLVDVRGSGQI
VLHVWDENNALINDYLRISAGPAITPDRVTVPLGNHICLSSNVRGVEGSLGTWSASGDSL
TLDPVSGVAVSHQIGRSTVSFEVSSALTTTTEINILPITKIIVVTPVVALTNGEQGSFEL
AVVVLEAEESSSSSCSPVDPPTSSPPFTCVVAYSPPIPEVDIKNVLGATATYVSEKGYAC
KIETLVGPLPSIATSDSAVIVEAVVVGRGQQGEVRSGPVTVPFYPSPVTDVSEVKLTNEN
PSVTIFLQGTPDVLNKLEVLACAVGSIEASLGSVDGRKRALTISSKDSLWMSELPELPIT
VSVSSPLTKNVVEVKVEVEQVGDGTCALPKAGLGILSLIVAVFTNYDQFLVSTACLIVII
ACLWIGYYALFGPGYKQTQQKSVFANSPAPPVMPAFSPTISSSPAGGDSVAKRLNYSGSQ
SPSRIKMWTVNSDPIYGAPPYRRGAYEGSPTYGGRSASSTLCRRPL
NT seq
5721 nt
NT seq
+upstream
nt +downstream
nt
atggtgggcgctatgatgttgtctagtcctaaaacgttgcacttatgtgtattaatatgt
tgtttgttgccccttttggcctctaaacttaatgtaccacgcgttcttcttccctacaac
catgaaattccttcaaatttcacactgaaggtgtttgaaggtggctgttaccagtggtcg
tgctcaagaagtgaggttgtgttgctcactgaggttatagaggatggttgtgccaatgag
gtacaggtgtctgccatcagccggtctccctccagacaaacggctattatactggcccaa
gactctggaagtggtggaattttgcgttgtgatgttcttgttgataccattcaccgtcta
gagatcgtgacaacaacgagagaattatacgtggaagaagcgccagaagagtttgaagta
cgagcttatgatgaccaaggtaatgaatttactacattggaaggcatagaaatgatatgg
gatcttcagaccttgactgaccgaggctctgtagtggctgcccagactgttctcaagttc
atgacctttgatgagtcaccatatgagatgccaccctctattgccccccttgaggaaagt
ggtcgcatgggttacatggccctcattgaaggaagacaaactggctcagctagactttct
gtcagggttgctcacccggcatataagcatcttgctccatcatcagtgaacctaatggtt
gtagccaacttgctgcttgatccagctgatgtgtatgtcctgcctcacactgcagttaag
tacacagtgttccagctcaaacaaggacacctctccaccattgatataccagcatcacaa
ttctacttgcaggttgcagatacagaaattgcagagctcaacgacgacggagtcagtatc
acggccaaaaccctaggcacaacacaggtgattctgaaagacaacaatgtgatctcctca
gagctggtgaaacaaccaactgccaacatacatgttgtagatccatcatatctcatcatc
tccattgagccccacaacaacccagctcttattcttggcaggcgctacgccttcatcgtc
aacgtctatgacaaacaggataataaaatcttcttggcagataatatagtaatggagaca
acagtaccatctgaacactttgcttcagaatatgtctccaggaatggctcttatgtgtat
ggtgtaactatcaagacgggaaaaactaaagttcaggcaactttaacagcaatagaagtg
ggagacaccattttagaaattactccacctttgaaggccagccaagaaatatcgatattt
gaccccattgctgtgataccacaacgcaccgtcctgccgtgggatccagtcacaaaacct
gtctacagtctcaacctaacagttgtgggtggctctggcagtgtgttgtggagcagcagc
aacacagaagttgttggagtatcacagatgggtgtgtgcagaaccaaggcatatgggtca
gtatctgttactgcagccatggtgctcaacccacacaacaaagatgctgctgagattcac
attgtagaggctattggcttggctctgttggagagtgttgttgaagttgaggttgaggag
aaactacccctacacgtggcctcctacacccagtggggagacaccaaggtgcccttcaca
gtgtgtcaccagttgcctctaaaagtagagcctttggaactcaccttcattgctttgcca
gatgtaaagacccccattgtcaagggttcctgtgccactctagaagttgtggggaagact
ccgggcttctcggaagttaaggtctcttacaaaagctctaaaggggaactggcagcatct
accatggtcgctgcattcaggcctcttcgtcctaccaacccctcatctgggaagacagtt
ttggctttgggatcatcaagggtagttctgtttgagggtggtcctcttccatggatcaac
aaacgctctactcacactgctaaagctcaggttgatgatcctgaaaaagtaggagtgcag
cttctggatgaagttaaacagtctgatgtgcacgctattgaagtagtgtgccacgatctt
ggggagtttacactcacactaactgttggcaacagtcctgtaccaacactacctcatccc
cgaagtgttagttcaactcttagtgttgtttgtgccttgccagatgctattagtttggca
gccattatcaagagacctgtagctgctgtgtcgccttgtccagctgtggcagagattgga
gtgtctgttgctcactgctataagcccctttcaatggaagtgattgtaactgactcggag
aatcttaagtttgacaacatatcatcactggttttaaagtggaatttgtcagatgaaaca
ttggcaagtatacctgctgaaccttccagcctcacacaagtctccactgtacagggcttc
agtcttcccatcaaaaccaagcagatgctaaagccaactggggaagttggagaagtgtta
gttagtgtgatgctcactggttttaacaagtttgtatctgaagcagcaagacagcatcct
ttgccttctctctctgcttctctaccactcaagctggttcaggatgctgtgttggagcca
tcatctgctgtcctctaccagcatgaggataacaagttggagttaacagtagctggaggt
tcggggttctttgagcttcagacagcagaaaatgatgttgcttccttggcctacatggat
aaagaaaggatagtcactgttcagccaatatcagatggagaattgacagtcactcttgta
gacgtttgtttagaagcagaaaatcctgccacatctcacatcaggattgcaagcattgcc
tcactggatttggtaattgttgatcgtgtagaactgggtggtgtattggaggctgaagtt
ttggcaaaggactctttgggccatccactgcctgcccacaacctcatgcacctgacacct
catccacaagcaaatatcatcacggcaagatatcagggagtaaacagtgaaggtaatgct
gtgtatgaggtcactgggcgtcacgtaggagacactacgctacgtgtcagtgctggtaat
ggtggtataggggaagcccttatctacagtcctgccaaacctattcaagtgtttccacct
ctggtgttacatcccaggaacatcactctcattattggtgctgtgtaccaggtggaaaca
aaaggtggtccttacccagatgctgttgtggagtattccatggtgaatgaaactattgcc
agcacatcacatgcagggatagtcactgctctctctctgggcacaacagtgctgatggct
caggctgttagtgtcagtatagaaactggtcgaaaaatttcttattctcgggatgtcgtg
attatcaatgtgattcctcttgagaaaattcgtattcatgccccattgactcatctggaa
actggcacaacaatgcccttgtatgcccttggaagtgaagactatcagaatcctctagct
tatgccacagctgttccaccattgctgtttgagtggtccattaacaacaaacaaattgct
tcattcatcgggatataccgtaagaatggattgttggagaccaaagaaaacaatggtatt
gttagagtgagggcagagcgaccaggacgtgtgtcagtgactctcaaggttaagcccagg
gtgccagccaaccatcctcactttcagattatagataatgttatcctcacagacaagtta
gaaatcaaagtatttgaatcattgaaactgaagtatccagatgatggatcatcgcacctg
ctgttgtccccacatgcagaggccaagataaccaccaacagggatggtgatggacaactg
tcttataagatagaaagatgtgatgagggtgaaggcaagaaacagggggtgatcactgtg
agtcctgatggcatggttaagtcaggcggcatcactggggaagccactgttgtcgtcacc
atcaaggagaaatgtggcatctcacaaagtttagcagtcctggtggaggttaaggatatt
agttacatgcaagctgaagtaggagcagtcatgagtgtatctccaggagaatctgtgagt
gtgatgcctcttggatcatcactacagcttactctctcataccatgacaatcgaggccga
gttttccatgcaactaatgcccagccaaccttcagaccttcaagatttgatcttgttggt
gtcagctatgggaacaccaacaactcattattggttgatgttcgagggtctggccagata
gtactgcatgtatgggatgaaaataatgctctcattaatgactatctacgcatcagtgca
ggtcctgcaatcactccagacagggtaacagtaccccttggcaaccatatttgtttgtca
tccaatgttaggggagtagaaggatcactaggcacatggtcagcaagtggggacagtctc
acattagatcctgtctcgggggttgctgtctctcaccagattggccgatctacagtttct
tttgaagtcagttcagcacttaccactacaacagaaattaacattttgccaattactaag
attattgtagtcactcctgtggtggctttaactaatggtgagcaaggaagcttcgaatta
gcagtagttgtcctggaagcagaggaaagttcatcatcttcctgcagtccagttgatcct
cccacaagctctccaccgttcacctgtgtggtggcttattccccgcccatcccggaggtt
gatattaagaatgtattaggagcaacagccacttatgtgtcagagaagggttatgcctgc
aagatagaaacactagttggcccattgcccagtatagcaacctcagactctgcagtaatt
gtggaggctgttgttgtgggccgcggacagcagggagaggtgcgttcaggtccagtcact
gtgccattctatccatcacctgtcactgatgtttctgaagtaaaactcaccaatgaaaac
ccatcagttactatcttcttgcaaggaacacctgacgtgcttaataaactggaggtactt
gcctgtgcagttggcagcatagaggcatctctgggttctgtggatggcaggaagagggcc
ttgactatctcttctaaggactcactgtggatgtcagagttgccagagttacccatcact
gtatctgttagttcaccgctcactaagaatgtcgttgaggtgaaggtagaggtggagcaa
gttggggatggaacctgtgccttacctaaagcaggcttgggaatccttagtcttattgtg
gctgtcttcactaactacgaccagtttcttgttagcactgcttgccttattgtcataatt
gcctgcttatggataggttattatgccctgtttggccctgggtacaagcagacacaacaa
aagagtgtgtttgctaactccccagcaccaccagtaatgccagcattttctccgactata
tcaagttctcctgcaggtggtgattctgttgccaagcgcctcaactactcaggctctcaa
tctccatcaaggattaaaatgtggactgtcaactcagatcctatttatggtgcacctcca
tacagaagaggagcctatgaaggttctcccacatatggtggtaggagtgcatcatcaaca
ctgtgcaggagaccgttgtag
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