Homarus americanus (American lobster): 121863387
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Entry
121863387 CDS
T07477
Name
(RefSeq) nephrin-like
KO
K24496
nephrin
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hame04990
]
121863387
Domain-containing proteins not elsewhere classified [BR:
hame04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
121863387
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
C2-set_2
ig
fn3
V-set
C1-set
C2-set_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
121863387
NCBI-ProteinID:
XP_042217939
LinkDB
All DBs
Position
Unknown
AA seq
1375 aa
AA seq
DB search
MEEVPWRRAGRGVPRLLLLLLLVLLHSGAAEEEKQVFRVRPENVQVRIGDNVYLCCIVDH
QQGKAQWTKDGFALGFERTVPGYPRYQYVGDEETGEHHLVIRGATLEDDGEYQCQVGPST
TNEAIWSGANVTVMVPPTSIVMVGWGDGALVEVMEGSKLKLECLVIDARPAPTVAWYRDN
IRIDRSRHQEVVEPGQHARMWNMRSHLHLRPQSGDDGRKYSCRAIHPALKYSTSPIIASV
NLAVFHPPGRPVISEYRTGEVLRSGESRFIVCHVLGGNPSPWVIWYRHGRPLNNAANNRI
KNNGTVTSAYPARQMRASGGVFVSQQVTASREEDGAVYECRVSSDLLTRPYTINVTLTVH
YPPTRVDITGPAAVALDEEYTLTCVTAPANPPATITWIVQGKSVSSATSMVTEDKEGGWV
TASKLTRKLIKQHNDKETKVECRADNSASLRGVSRTHVINILERPGLPVVEVETDEAVAG
DKVIVLCTSRGGNPSPDLKLYKGSQLLEKVKVQTVGTVTQARAVVKVNASDNEETIRCEA
TNLATSSPVEGQTNINVNCELLEVCHHVPPSIVNWHSGTQSLEEPIVRRTPGLFRGTVTR
SKVMVRVKAEDNGRIISCEAENGFGVGVTTNITLNVLHSPVWVFAPSGKLDVLEGGDLTI
TAEAAANPTPIKYSWMHETGKVVGEIATGEGNVGELKLDRVGRHMAGTYTVTATSAKGTI
IASFIIDVQYGPENVTAASRVLVDQNDTATVLCSAVGNPTPNITWTRVVEGTRQTLSWGM
GEAHLVVEWAAPSDTGVYYCHASNVVSSPPPATTAIVVTQGPTYTSARLEEEEVAGKSWA
LVGGSGLLDCRVKASPQPAFEWITEDGPISDSDRKYDIHLPQLMDGVAEWSSVLEIRNVV
AKDFTSYICVAYNPLGSHTLNYTLNPPTHPGTPLSLNVTVLNDTSVELTWVDNTAATTTA
GYTIRYRTTDQRQYELVDIPGTNTSGLVIEGLKPGTEYSFSIQSYNDMGRSYHTSPPVVI
NMSDMVEDKTDTEDRPKGMPFVVFVLIAVTGGVLIVLNVIGVLCFLRRRVVFRGFRASST
KSSAYEVPSPSLMDQLSLSSSDDIPPPDYEQVMGSCHLDPFGGSLQDISLPSGSRGTPSL
ARSSPMLTSSSTISNSGADIIAPPDDFSSGIVNIGADDHEHHSLHDGDSWANLEADLPTC
HQSGFERSPFDHLLCHQSSYDLPRPVGHSSASTFRSMESLLNSRPYQPQQTYTLPRRPSQ
VIFHGHPHLQHEREHYQQRGRHVFQYPLVRQLSSSVDYQQPQTDDQYFLQQQQRYHQQPS
LGAAMSVPPPYASLDPSTLYSLHSTFFEDGARPSTSYSDWPPMSPTYPRDDYRDS
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagttccctggaggagagcaggtcggggagttccccgcctgctgctgctgctg
ctgctggtgctgctccactctggtgcagctgaggaggagaaacaggtgttccgagtgcgc
cctgagaatgtacaggtgcggataggagataacgtttacctgtgctgtatcgtggatcac
cagcaaggcaaggcgcagtggactaaggacggcttcgctctggggtttgaacggacggta
cctggttatcctcggtaccagtatgtgggtgacgaagagaccggcgaacaccatttggtc
atccgtggtgccaccctcgaggacgatggagagtaccagtgccaagtaggacctagtacc
actaacgaggcaatctggtccggtgccaacgttactgttatggtgccacccacaagtatc
gtgatggtgggctggggtgacggcgccctggtggaggtcatggaaggatccaaactcaag
ctagaatgcctggtgattgatgcccgaccagcccctactgtcgcttggtacagagacaac
ataaggattgaccgaagccgtcaccaggaagtagtcgagcctggacaacacgccaggatg
tggaatatgaggagtcacctgcacctacggcctcagtctggtgatgacggccgcaaatac
tcctgcagggccatccaccccgccctcaagtattccactagtcccatcatcgcgtccgtc
aacctcgctgtcttccatccaccaggtcgacctgtaattagcgagtacagaacaggtgaa
gtccttcgttcaggagagagtcgctttatcgtctgccacgtgctgggaggtaacccaagc
ccatgggtcatctggtaccgtcatgggcgtcccctcaacaacgccgccaacaaccgcatc
aagaataacggcacggtgaccagcgcctaccctgccagacagatgagagcctctggcggc
gtcttcgtcagccagcaagtgaccgcttcaagggaggaggacggcgctgtgtacgagtgt
cgcgtctctagtgacctcctcaccaggccttacaccatcaacgtcaccctcaccgtccac
tatcctcccactcgtgttgacattactgggccagccgctgtagcccttgatgaggagtac
acccttacctgtgttactgcacctgctaacccccctgccactatcacctggatcgttcaa
ggcaagtcagtcagttcagctacatcgatggtgactgaggacaaggagggaggctgggtc
accgcttccaagctcacccgaaaactaatcaagcaacacaacgataaggagacaaaggtg
gaatgtagggcggacaattctgcttctctcaggggcgtatcacggacccacgtcattaac
atcctcgagcgcccaggactgcccgtggtggaggtggagactgatgaagctgtggctggc
gataaagtgattgttctttgtacctcccgcggcggcaaccccagtcctgacctcaagtta
tacaaaggcagccagctgttggagaaggttaaagtacagactgtagggacagtaacccag
gcaagagctgtggtgaaggtgaacgcctctgacaacgaggagacgatcagatgtgaggca
accaatctggctaccagctcccccgtcgagggtcagaccaacattaacgtgaactgtgag
ttattggaggtatgtcatcatgtgccaccctccatcgtcaactggcactctggcacccaa
tccctggaggaacccattgtcaggcgcaccccagggctcttccgtggcactgttaccagg
tccaaggtgatggtaagggttaaggctgaagacaacgggcggataatatcttgtgaagct
gagaacggttttggcgtcggcgtcaccaccaacattactctcaacgtgctgcactcaccg
gtgtgggtgttcgctccgtcaggcaaactggatgtacttgaagggggcgatctaaccatc
acagctgaggccgctgccaaccctacacctatcaagtacagctggatgcatgagactggg
aaggtggtgggagagattgctactggagaaggcaatgtcggggaacttaagctggatcgt
gtggggcgtcatatggcaggcacatacaccgtgacggccaccagcgccaagggcaccatc
atcgcctccttcatcatcgacgtccagtacggaccagagaacgtgactgcagcctcccgc
gtgttggtggaccagaacgacacagccacagtcctctgctctgctgtcggcaaccccaca
cctaacatcacctggaccagggtggttgaaggcaccagacagaccttgtcgtggggtatg
ggcgaagctcatctggtggtagagtgggcggcaccctcagacacgggcgtctactactgc
cacgcctccaacgtggtctcttcccctccccccgccaccaccgccatcgttgtcacacaa
ggccccacatatactagcgccaggctggaggaggaggaagtggcagggaagtcatgggcg
ctggtgggaggtagtggactcctggactgtcgcgttaaggcttctcctcaaccagccttt
gaatggatcacagaggacggccccatcagcgacagcgacaggaagtatgacatccacctc
cctcagctgatggacggggtggcggagtggtcatctgtgttggagatcaggaacgtcgtt
gccaaggacttcaccagctacatctgcgtcgcctacaaccccctcggctcccacaccctc
aactacaccctcaacccgcccacacaccctggcacgcccctcagtctcaatgtgacggtg
ttgaacgacacaagtgttgaactgacgtgggtggacaacacggcggcgacaaccacggcg
ggatacaccatcagataccggaccacagaccagcgacagtacgagctggtcgacatcccc
ggcaccaacacctcaggcttggtcatcgaaggactcaaaccagggaccgagtattccttc
agcattcagtcctacaacgatatgggtcgctcgtaccacacctctccccccgtcgtcatc
aatatgagtgatatggtggaagacaagactgatacagaagacaggccaaaggggatgcca
ttcgttgtcttcgtcctgattgccgtcactggaggcgttctgattgtcctgaacgtgatt
ggtgtcctgtgtttcctccgccgtcgtgttgtgttccgtggatttagagcgtcgtcgacc
aagtcgtcggcctatgaggtgccgtcaccctccctgatggaccagctgtcactcagctcg
tctgacgacatcccaccgccagactacgagcaggtgatgggctcatgtcatcttgatccc
ttcggcgggagtcttcaggatatttctctaccatctggctcccgcggtactccctcacta
gccaggagtagccccatgctcacctcctccagcactatctccaacagcggcgccgacatc
atcgctcctcctgacgacttctccagcggcatcgtcaacattggtgctgacgaccacgag
catcactccctccatgacggagactcgtgggctaacctggaggccgacctgccaacctgc
caccagtcgggtttcgagcgatctcccttcgaccacctcctctgtcaccagtcttcctat
gaccttcccagacccgtcggccacagttctgcgtcaacattccgcagtatggaatcactc
ctcaacagccgtccttaccagccacagcagacctacaccttgcccaggcgtccctctcag
gtcatcttccacggacatcctcacctccaacacgagcgagaacattaccagcagagggga
cgacacgtgttccagtacccgctagttcggcagctgtcctcatccgtcgactaccaacaa
ccacagacagatgatcagtacttcctgcaacaacagcagcgttaccaccagcaaccttca
ttaggggccgccatgagcgtccctccgccctacgccagccttgacccctctaccctgtac
tcccttcactcaaccttcttcgaggatggtgccagaccctcaacaagttactcagactgg
ccccccatgtcgcccacctacccccgggacgactacagggactcttaa
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