Homarus americanus (American lobster): 121879632
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Entry
121879632 CDS
T07477
Name
(RefSeq) ATP-dependent RNA helicase A protein-like isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hame03041
]
121879632
03012 Translation factors [BR:
hame03012
]
121879632
Enzymes [BR:
hame01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
121879632
5.6.2.6 RNA 3'-5' helicase
121879632
Spliceosome [BR:
hame03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
121879632
Translation factors [BR:
hame03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
121879632
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
dsrm
Helicase_C
DEAD
HA2_C
HA2_N
DND1_DSRM
AAA_19
AAA_23
ATPase
Cas3-like_C_2
nSTAND3
Motif
Other DBs
NCBI-GeneID:
121879632
NCBI-ProteinID:
XP_042242231
LinkDB
All DBs
Position
Unknown
AA seq
1320 aa
AA seq
DB search
MLLPINSNSIFQQSQREVFGRWSCWLCTPSLSTSSSLCRLLLRVLTLTHQRHQHYQDGIK
MSENIKAWLYAFCGKKKVTPEYEVRNSGPKHRQRFLCEVRVPTYNYIGVGNSTCKKDSQT
NAAKDFVQFLIRQQEVTPSEVPDIQGADVSNDGGAPEEQGEFHPSEPMAPVPGLRDEGNV
YRPIQRGGRHMTYMERVQERKATEEAEDVDLTANIHGNWTIENSKSRLHMFLQTNKIKAD
YKYSAIGPDHNRSFVAEMSFYVKALQRNINARETGSNKQAASKSCSLSLVRQLYHLNVIE
AFSGTLKKKETEQLKPYGVSLSPEHIALIDSVIKITGVHPMEPSGDPSQPCTLIPDVKLT
DFETSDGPKTTGGVVSWSPPQPNWNAWTSCNLDEGPLATLSLDQISSDLQKTHRDRLQTD
QVLQSRTQQRTQLPVFHMKQNIMSAIYDNPVTVIRGNTGCGKTTQVCQFILDDYIQSGSG
AYCNIVITQPRRISAVSVADRVAAERAEDIGESVGYSVRFESALPRPYGGILFCTVGVLL
RKLEAGLRGVSHVIVDEIHERDINTDFILIVLRDMVRAFPDLRIILMSATIDISLFSEYF
GNPCIIEVEGRAFPVQQYFLEDCIELTKFVPSPDSRKRNKKEKDEELPGEEPEENLNIVR
SDKYSPATKQSLAMMNEKDMNFELVEALLKYVDGLDTPGAVLIFLPGWNLIFTLMRHLKQ
HPVFGGHRYCVLPLHSQLPREDQRRVFDPVADNVRKIILATNIAESSITIDDVVFVVDSC
KAKMKLFTSHNNMTNYATVWASRTNLEQRKGRAGRVRAGCCFHLCTLARFEKLEEHMTPE
MFRTPLHEVGLSIKLLRLGAIGEFLSKAIQAPPIDAVIEAEVTLREMKCLDLRDELTPLG
RILARLPIEPRLGKMVILGCIFFCGDAMCTIAAHNSTSPEIFIIPPEHRRLSPFQRAFAG
NRFSDHIAALSAFNAWEEARAGGEDAEIRFCDYKGLSMPTLRVTWEAKNQLKELLVNAGF
PEECLLPQSYNFYGPDPKLDLVVGLLVLGHYPNVCAHKDKRKVLTTENKAALIHKSSVNC
SNYEMTFPSPYFVFGEKIRTRAVSCKQMTMVTPLHLMLFGARRVEAVEGVVRLDGWINLD
MPAELAAKVMVLRPSVESLVIKGAITPEGVTEPSHQDEQVMNCLRQLSRLNAGRHNMEQI
STGGFNTPRPPRQFGGPPMKRMRTDDGPGRDMGGGFRGGYSNNSGFAERASRGYGGGRGG
YGGGFRNSGFRGGGYGGGGGSNRGGYGGYRGDRGGYGGGRGFGGNRGGYGGDQGGYGGNH
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atgctgctaccaatcaattctaacagcatctttcagcaatctcagcgtgaagtgtttggt
cggtggagttgttggctgtgtacaccatcactcagcactagttcctccctctgccgcctc
ctcctcagagtcctcaccctaacacaccaacgccatcaacattatcaagacggaatcaaa
atgtcggagaacataaaggcatggctttatgccttttgtgggaagaagaaggtcactcca
gaatatgaagtccgaaattcaggcccaaagcatcgccaacggttcttgtgtgaagttcgt
gtgcctacctataactacattggtgttgggaattcaacatgcaagaaagattcccaaact
aatgctgccaaggattttgtacagtttctcatccgccagcaagaggtgactccaagtgag
gttccagatatacagggggcagatgttagtaatgatggtggtgctcctgaagaacaagga
gagtttcatccctctgaaccaatggctcctgtccctggcctcagggatgaaggaaatgtg
taccgtcctattcaaagaggaggtcgacatatgacatacatggagcgtgtgcaggaacga
aaagccacagaggaggctgaagatgttgatcttactgcaaacatccacggtaattggaca
attgaaaattcaaaatctcgtcttcacatgtttcttcaaacaaacaagatcaaggctgat
tacaagtacagtgcaattggtcctgatcataacaggagttttgtggctgaaatgtccttc
tatgtaaaagcacttcaaaggaatattaatgcacgagaaactgggtcaaacaaacaagct
gccagtaagagttgttccctgtcactcgtgcgacaactctaccacttgaatgtgattgaa
gcattttctggaacacttaagaagaaggaaactgagcagctcaaaccttatggagtttct
ctctcacccgaacacatagccctcatagattctgtgataaagattacaggtgttcaccca
atggaaccatctggggatccttctcaaccctgcactctgattcctgatgttaaattaact
gattttgaaacctcagacggccctaagactacaggtggagttgtgtcttggtcaccgcct
cagccaaactggaatgcatggacaagctgtaatttggatgagggtcctttagctacactt
tctttggatcagattagttctgatttacaaaagacccatcgagatcgcctacagacagac
caggtgcttcagtcaaggactcaacagagaacacagttaccagtgtttcacatgaagcag
aatataatgtccgcgatatatgataacccagtcactgtcatcagggggaacaccggctgt
ggaaagacaactcaggtttgtcagttcatcttagacgattacattcagtcaggatcagga
gcctactgtaatatagtcatcactcaacctcgacgtatatctgcggtgtccgttgccgat
cgcgttgctgccgagcgagcggaagacatcggcgagagtgttggctattctgttcggttt
gagtcagcactaccaagaccatatggaggaattttgttctgtactgttggagttttgttg
agaaagctggaagctggactgagaggtgtttctcacgtgattgttgatgaaattcacgag
agggacattaatacagacttcatcctcattgtcctccgtgatatggtacgagccttccca
gatcttcgcattattctcatgtctgccaccatagacatttctctcttctctgagtatttt
ggcaacccgtgtataattgaggtggaaggacgagccttccctgtacagcagtacttcctg
gaggactgtattgaactcactaaatttgttccatctccagattccagaaaacggaataag
aaggagaaagatgaggagttgcctggtgaagaacctgaagagaatctgaatattgtacgc
tctgataagtactcaccagccacaaagcagtccttggccatgatgaatgagaaagatatg
aactttgagttggtggaagccttacttaaatatgttgatggccttgacacaccaggagca
gtgttgatattccttcccggttggaacctcatcttcactctcatgagacatcttaagcaa
cacccagtgtttggtggacaccgttactgtgtgttacctctacactcgcagcttccaaga
gaggaccagcgcagagtatttgaccctgttgctgataatgtcagaaagattatcctggca
accaacattgctgaatcctccatcaccattgatgatgtggtgtttgtggttgactcgtgc
aaagcaaaaatgaagctcttcacgtcacacaacaacatgaccaattatgctacagtgtgg
gcctcgcgtaccaatctggagcagcgcaagggtcgtgctggaagagtcagagccggctgt
tgtttccacctgtgcactttggccaggtttgagaaactagaggagcacatgacaccagag
atgttccgcacccccctacatgaagtgggtctctctattaagcttttacgtcttggggcc
attggggagtttctttccaaggctattcaggctccacctatcgatgctgttattgaagca
gaagtcacattaagagaaatgaaatgtttggacttgagagatgagctaactccacttggt
cgtatcttggctagactgccaatagagcctcgcctgggtaagatggtgattcttggttgt
atattcttctgtggtgatgccatgtgtactattgctgctcacaactcaacttctcctgaa
attttcataatccctccagaacaccgtcgacttagcccattccaacgtgcttttgctggc
aatagattcagtgaccacatagcagcactcagtgcatttaatgcatgggaggaagcccga
gctggaggagaagatgctgagatacggttttgtgattacaaagggctctctatgccaacc
cttcgggttacttgggaagccaagaatcagctgaaggagttacttgtgaatgctggcttc
ccagaggagtgtcttctgcctcagtcatataacttctatggtccagaccctaagttggac
ctggtagtgggtctcctcgtccttggacactaccctaatgtctgtgcccacaaggataaa
cgaaaggtgctgaccacagaaaataaggctgctctcattcacaagtcatctgtcaactgt
agcaactatgaaatgaccttcccctctccatattttgtctttggagaaaagattcgtaca
cgagcagtatcatgcaagcagatgacaatggtgacaccgctccatctgatgctgtttgga
gctagacgtgtagaagctgtggagggtgttgttcgtttagatggatggatcaacttggac
atgccagcagaacttgcagccaaggttatggtattgaggccaagtgtagagtccctcgtt
attaagggagcaattaccccagagggtgtaacagaaccttcacatcaagatgaacaggtc
atgaactgtctgcgtcagctgagccgcctgaatgctggtcgtcacaacatggaacagatt
agtacgggaggcttcaacacaccaagacctccgcgccagtttggtggaccgccgatgaag
agaatgaggacagatgatggaccaggtagagatatgggtggagggttcagaggaggttac
agcaacaacagtgggtttgcggaaagggccagtaggggctatggtggtggccggggtggg
tatggaggtggcttcagaaacagtggttttagaggtggtgggtacggtggtggtggtggt
agcaatcgtggaggttatggtggctatcgtggagaccggggtggctatggtggaggtaga
ggctttggtggaaatcgaggaggttatggtggagaccaaggaggctatggtgggaaccat
tga
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integrated database retrieval system
