Homarus americanus (American lobster): 121879722
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Entry
121879722 CDS
T07477
Name
(RefSeq) nephrin-like
KO
K24496
nephrin
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hame04990
]
121879722
Domain-containing proteins not elsewhere classified [BR:
hame04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
121879722
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
C2-set_2
ig
V-set
C1-set
C2-set_3
fn3
Ig_DSCAM-DSCAML_C
ICAM1_3_5_D2
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
121879722
NCBI-ProteinID:
XP_042242423
LinkDB
All DBs
Position
Unknown
AA seq
1563 aa
AA seq
DB search
MPHESRFVDAVIGVVGDAQVFSVRPESVQVLAGEDVILRCVVANQQGKAQWTKDGFALGF
ERDVPGYPRYHYIGDSSKGEHHLVIKGVTLEDDGEYQCQVGPTITTSPIWAAANLTVMVS
PTSISLVGVGDGDVVEVRAGDTLRLECLVTDARPPPTLAWYRDAITLHKGLHEDVVEASR
LPRRWSVRSRLVVRVEAVDDGQQYSCRALHPALHHSPTTLVASVNLAVLHAPGPPVITGY
ETGEVLVAGEQRTLICQVVGGRPRPWVTWYRHGRPLNHASTHILRDPEESSSTNTASTSS
SSSEGRAWKGVRIKQVVRATQEEDGAVYECRVSSDLLPRPLTTNVTLTVHYAPAQVMVFG
PSVVAAGQLFSLTCRTSPANPPATLTWHLQGSRVSTGTTEVSEHEGGGWVSTSQLARTQL
MTQATADCQATHPAAKHSISYTHLIAVIKRPGWPEVEVVEGGEVKAGEQMTVLCTSRGGN
PPPTLTLFKAGQKVTSTVEEREDGLTKARAVLQVTAADNGQQLTCHVSNPATSTPMAAHT
TINILFPAWEVSGWVSPGRVEAGEVATLTCEATSSVPPSTITWHTTGAPLGEATVTHSQG
LYGGTNTRSEVSVRTMAEDNGRTFTCEAENGLGVSLSTNVSLNVMHGPVWVWAPSGTLDV
VEDEDLTITALAAANPGPVRYSWWRGPAAMEGELSDGGSGQLTLLRVDRHMSGDYTVISR
TSHSAINSSFVINVQYGPEDVLAAERVTVDEDGAATVLCSATGNPTPNITWTKNSDNTSL
LTVLASGVGKARLVVEWASRADTGIYHCHAYNIVASYPPLSTAIVVTQEPTSATTNTQEE
EMNRSWAHIGGSGWLDCRVKAAPAPTFRWTTSNNRVVSNSKKYFIHVPQLVDKVIEWSSL
LEIRSISIRDYINYTCTAHNSQGSYAINFTLGPPIIPGIPDNLNIVTMSTSDAIVTWRKN
ILGAQPTGYTVRYQATDAQNYEYVDVPGNNSTTTKITNLTPGAEYSFVILAYNVHGHSNY
SYPPIKVTLLGLVEEVASSSSVEGQQPRMPLLILLLISLTATALLVLNVAIIVCFVRRRA
MKRNISASSSKTTALEIYTPTSGAAASGDELPLTSFSDIPPPEYQSLDCQTREDDCEQTS
LISPHINVEPPEPLVTTPTIGTSPRSGSTSPLLNGGISVQNNDTLLENTKLSPTDTVTNL
TPGSPSKQERKMSKDSITPVHSSNTPDVCPVTTSSCEPLLQQQESFNTYSEDDQGSLSSH
HSNSSYGFESGQLRPKLYSSYQPRLTTQVIYHGQPHIQQQLEQQQQQQQQQHYQQSLPCC
QQISPSMKDKQLLNPISSLHSHLNPSRLSTSTSSCCDATCRQSYVTDTPVGYATLQPRRS
CLKASQCNTLQRSHSDHNYTYNSLQCVYHNPVMELNPDICCQNSFCSNPQLCTQQSQRSH
YERAQEFPIYLAKSRPVDRGCTRHNSDSGHCTYRNTPPYEPKHSTVPPDLCKVEPSSAKR
VGWKEIVPDSPGRGTLASRGSTDTSTSSTTSTVTLGPARYPQHQHCRNNSERNLGMETRD
KIR
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatgaatcaaggttcgtggacgcggtgattggtgtggtaggagacgcacaggtg
ttcagtgttcggccagagagcgtgcaggtgttggcaggtgaggacgtaattctcaggtgt
gtcgtggctaatcaacaaggcaaggcacagtggactaaggatggctttgcattggggttc
gagcgtgacgttccgggttaccctcgttaccactacataggtgactcgagtaagggggag
catcacctggttatcaagggggtgacactcgaggatgatggagaataccagtgtcaagta
ggacctaccatcaccacctcccccatctgggctgctgccaaccttactgtcatggtgtcg
cctacgagcattagtctggtgggtgttggtgacggggacgtggtggaggtgagagcaggc
gacacactacggctcgagtgtttggtgactgatgccaggccgcctcctaccctggcatgg
tatagagacgctatcactctacataaaggtctacacgaggatgtagtggaggcgtcaaga
ctaccccggaggtggagtgtgaggagccgcctggtggtgagggtggaggcggtggatgac
ggtcaacagtactcatgccgcgccctccaccctgccctccaccactcacccaccaccctc
gtcgcctccgtcaacctggctgtactgcatgcccctggaccacctgtaatcaccgggtac
gagacaggtgaggtactggtagcaggggaacagcgcaccttaatctgccaggtggtgggt
ggacgccctcgaccttgggttacctggtacagacacggccgccctctcaaccacgcctcc
acacacatactccgcgaccccgaggagtcctccagcaccaacacggcctccacctcctcc
tccagtagtgaagggagggcgtggaagggcgtgaggataaagcaggtagtgagagcaaca
caggaagaggatggagccgtgtacgagtgtcgtgtatcaagtgatctgttacccagacct
ttaacaactaacgtcaccctcactgtacactacgctccggcccaggtgatggtgtttggc
ccatcagtggtggcggccggtcaactcttctctctcacctgccgcacctcacctgccaac
cccccggccaccctcacctggcatctccaagggtcacgggtatctacgggcacaactgaa
gtgagtgaacatgaaggaggtgggtgggtgagcacctcccagctggccaggacccagttg
atgacacaggcaacagcggactgccaggcgacgcacccagccgccaaacactccatctct
tacacccatcttattgctgtcatcaaacgcccaggatggccagaggtggaggtggtggaa
ggcggggaggtgaaggcaggcgaacaaatgactgtgttgtgtacctcccgtggcggtaat
cctccacctaccctcacgttgttcaaggctgggcagaaggtgacgtcgacggtggaagaa
cgtgaggatgggttgacgaaggcccgggcagtgctacaggtgactgcagctgataatggt
caacaactcacctgtcacgtctccaacccggccaccagcacgcccatggccgcccacacc
accatcaacatcctctttccagcatgggaggtatcagggtgggtgagtccaggcagggtg
gaggccggggaggtagccaccctgacctgtgaggccacctccagcgtgccgccctccacc
atcacctggcacaccaccggagctcctctgggggaggccactgtcacccactcccagggc
ctctatggtggcactaataccaggtcggaggtgagcgtgaggaccatggctgaggataac
gggaggacctttacctgtgaggcggagaatggcctgggtgtctccctgtccactaacgtc
tccctcaacgtcatgcatgggccagtgtgggtgtgggcgccatcaggtactctggacgtg
gtggaggacgaggacctcaccatcaccgctctggccgccgctaacccaggacctgtgagg
tactcgtggtggcgtggaccagctgccatggagggggagttatctgatggaggcagtggg
cagctgacactgttgcgggtagatcgtcatatgtctggggactacactgtcatttcccgg
acttcacactctgcaataaactcttccttcgtcatcaatgtacagtatggtcctgaggat
gtgttggcagctgaacgggtgacagtagacgaagatggtgccgccacagtgctgtgttct
gctactggcaaccccacacctaacattacctggaccaagaactctgataacaccagcttg
ttgacagtgctggcctcgggtgtaggtaaagctcgcttagtggtggaatgggcatcacgg
gcagacacgggtatctaccactgccacgcctacaatattgttgcatcatatcctcccctc
tctacggccattgttgtgactcaggaaccaacttcagccaccacaaacacacaagaggaa
gagatgaacagatcctgggcacacattggtgggagtggatggctggactgtcgtgtgaag
gccgctccagcaccaaccttcaggtggaccaccagcaacaaccgggtggtgtctaacagc
aaaaaatacttcatccatgttcctcagctggtagacaaggtgattgagtggtcatcactt
ttagaaatcagaagcatcagtatccgtgactacatcaactacacctgtacggctcacaac
tctcaggggtcgtatgccatcaacttcacacttggtccgcccatcatcccgggtatccca
gataacttaaacattgtgacaatgtccactagtgatgctattgtaacatggaggaaaaat
atccttggagctcaacctacaggctatactgtaaggtaccaggcgactgatgctcaaaac
tatgaatatgtggatgttcctggtaataactcgacaaccaccaagatcacaaatttaaca
ccaggtgcagaatattcttttgtcattctggcctacaatgtgcatggccactcaaactac
agttacccgcccatcaaggtcactttgctcggcttggtggaggaagttgccagcagcagt
agtgtggagggtcagcagcccagaatgcctctcctcatcctgcttctcatctccctcact
gcaacagctcttctagtcctcaatgttgcaataattgtctgctttgtcagaagacgggcc
atgaaaagaaacatatctgcttcttcaagcaaaacaactgccttagaaatttacacccca
acttctggagcagctgccagtggagatgagctgccattaacttcatttagtgacattcca
cctccagagtaccagtctcttgattgtcaaacgagggaggacgactgtgaacagactagt
cttatcagtccacacatcaatgtggagccgccagaaccactcgttacgacaccaaccatt
ggaacaagtcctagatctggaagtacaagtcccttactcaatggggggatcagtgtgcag
aataatgatacactgcttgaaaatactaaactatctccgactgatacggtaaccaatttg
actcctggtagcccttcaaaacaagaaagaaagatgtctaaagattctattactccagtt
cattcgtcaaatactccagatgtttgtccagtgacgaccagtagttgtgaacctttactc
cagcaacaagaatcctttaatacgtattcagaagatgatcaggggtctctgtcgtcccac
catagtaacagctcgtatggttttgaatcgggacagctacgcccgaagctgtactcctcg
taccaaccaagactgaccactcaagttatatatcatggtcaaccacacatacagcaacag
ttagagcagcaacaacaacaacaacaacagcagcactatcaacaaagcttgccatgttgt
caacaaatctcaccatcaatgaaagacaagcagttacttaatcctatttcatccttacat
tcacatctgaatccttctagactttcaacgtccacttcaagttgttgtgatgccacttgc
agacagtcttatgtcacagatacgccagtggggtatgccaccttacagcctcggagaagt
tgtctgaaagcttcacagtgcaacactctacaacgttctcactcagaccacaactacacc
tacaatagcctgcagtgtgtgtatcacaatcccgttatggaacttaatccggatatttgt
tgccagaacagcttttgcagcaaccctcaactctgtactcaacaaagtcaaagaagtcat
tatgagagagcacaagaatttcccatttacttggcgaagtcgagacctgttgatagagga
tgtaccagacacaacagtgatagtggacattgtacatataggaatactcctccctatgaa
ccaaagcattccacagtaccacctgacttatgtaaagtagaaccatccagcgcaaaaaga
gtcgggtggaaggaaatagtccccgacagtcctggaagagggacactagcttcccgtggt
tcaaccgatacttcaacatcatcgactacctctactgtaaccttgggtccagcaagatat
ccacaacatcaacactgcagaaataacagtgaacgaaatttaggcatggaaaccagggat
aaaattagataa
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integrated database retrieval system