KEGG   Hyperoodon ampullatus (northern bottlenose whale): 307055068
Entry
307055068         CDS       T11951                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
hamp  Hyperoodon ampullatus (northern bottlenose whale)
Pathway
hamp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hamp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    307055068 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hamp03041]
    307055068 (SMNDC1)
Spliceosome [BR:hamp03041]
 Complex A
  U2 snRNP components
   U2 related factors
    307055068 (SMNDC1)
 Complex B
    307055068 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    307055068 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR TraX-like
Other DBs
NCBI-GeneID: 307055068
NCBI-ProteinID: XP_079563137
LinkDB
Position
1:complement(<209634159..209643651)
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLAS
SDNFASTQPTHSWKVGDKCMAIWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLL
NLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcggaggatctagcaaagcaactggcaagctacaaagctcaactccagcaagttgaa
gctgcgctgtctggaaatggagaaaacgaagatttgctaaaattaaagaaagatttgcaa
gaagttatagaactaaccaaagaccttctgtcaactcaaccttctgaaacgctggcaagt
tcagacaattttgcttctactcagcccactcattcatggaaagtaggagacaagtgtatg
gcaatctggagtgaagatggacagtgttatgaagcggagattgaggagatagatgaagaa
aacggcaccgctgcaatcacttttgctggctatggcaatgctgaagtgactccactgttg
aacctcaagcctgtagaagaaggaaggaaggcaaaggaggacagtggcaacaaacccatg
tcaaaaaaagaaatgattgcccagcagcgtgaatataaaaagaagaaagctttgaaaaaa
gcacagagaataaaagaacttgaacaagaaagagaggaccagaaggtgaaatggcagcag
ttcaacaacagagcctattctaaaaacaaaaaaggccaggtaaagaggagtatttttgct
tcacctgagagtgtaactggcaaagttggagtaggaacttgtggaattgctgataaacct
atgacacagtatcaagatacctctaaatacaatgttaggcatttgatgcctcaataa

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