Hetaerina americana (American ruby spot damselfly): 139700563
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Entry
139700563 CDS
T10852
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
hamr Hetaerina americana (American ruby spot damselfly)
Pathway
hamr03018
RNA degradation
hamr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hamr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139700563
09123 Folding, sorting and degradation
03018 RNA degradation
139700563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hamr03019
]
139700563
03041 Spliceosome [BR:
hamr03041
]
139700563
Messenger RNA biogenesis [BR:
hamr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139700563
mRNA degradation factors
5'-3' decay
Lsm complex
139700563
Spliceosome [BR:
hamr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
139700563
Complex C
U2 snRNP components
139700563
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
Hfq
Mlf1IP
DUF150_C
Motif
Other DBs
NCBI-GeneID:
139700563
NCBI-ProteinID:
XP_071455193
LinkDB
All DBs
Position
Unknown
AA seq
124 aa
AA seq
DB search
MADDSEQVTAVSVKEPLDLVRLSLDERILVKMRNGRRLRGRLHAFDQHLNMIIGDVEETV
TIVEIDEETYEEIYKEKKRHVPMLFVRGDGVILVSPPGKSWNLSISKSDAAMILYLCTFY
LRLS
NT seq
375 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgattctgaacaggtcacggccgtaagtgtcaaggagccgttggacttagtt
cggctgagtctagatgaaagaattttagttaaaatgaggaatgggaggcggttaagaggg
cggttacatgcctttgaccagcacttgaatatgatcattggggatgtagaagaaactgtt
acaatagttgaaattgatgaagaaacatatgaagagatttataaagagaagaagcgacat
gtaccaatgctctttgttcgtggtgatggtgtgatattagtgtcaccccccgggaagagt
tggaatctaagtatttctaagtctgatgctgctatgattttatatctttgcacattttat
ttaagattgtcatga
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