Halomonas sp. MS1: NF683_17915
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Entry
NF683_17915 CDS
T09972
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hams
Halomonas sp. MS1
Pathway
hams03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hams00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NF683_17915 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hams03400
]
NF683_17915 (nth)
Enzymes [BR:
hams01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NF683_17915 (nth)
DNA repair and recombination proteins [BR:
hams03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NF683_17915 (nth)
Prokaryotic type
NF683_17915 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UTD55000
LinkDB
All DBs
Position
3858746..3859384
Genome browser
AA seq
212 aa
AA seq
DB search
MNAQKRHEIFARLQAENPHPTTELNWSTPFELLAAVLLSAQATDVGVNKATDKLFPVANT
PQGIIDLGIDGLKSYIKTIGLFNTKAENLMKTCHLLINQHGGEVPETRKALEALPGVGRK
TANVILNTAFGQPTIAVDTHIFRVSNRTGIAKGKDVVEVEQKLLRHVPNAFKQDAHHWLI
LHGRYTCIARKPRCGSCIIEDLCDYKDKTELA
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcccaaaagcgtcatgaaatttttgctcgcctacaggcggagaatccccacccc
acgactgagctaaactggagcacgccctttgaactgctagctgcggtgctgctgtctgct
caagcgacggacgttggtgttaacaaggccactgacaagcttttccctgtggccaatacg
ccccaagggatcattgacctggggatcgatgggctaaaaagttacattaaaaccatcggg
ctgtttaacactaaagccgaaaacctgatgaaaacctgccacttgctgatcaatcaacat
ggtggcgaggtacctgaaacacgcaaagcactggaagccttgccgggggtaggcagaaag
accgccaatgtgattctaaacactgcgtttggtcaacccaccatcgccgtagacacgcac
atttttcgagtttctaaccgcacgggtatcgccaaaggcaaagatgtcgttgaggttgag
caaaagctactacgccatgttcccaatgcatttaaacaggacgcccaccactggctgatt
cttcatgggcgctatacctgcattgcccgcaaaccacgctgcggcagctgcattattgaa
gacctgtgcgactataaagacaaaaccgaacttgcttaa
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