Helianthus annuus (common sunflower): 110864972
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Entry
110864972 CDS
T05101
Name
(RefSeq) ABC transporter I family member 19
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110864972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110864972
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110864972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
nSTAND3
ORC-CDC6-like
AAA_29
SMC_N
NACHT
AAA_15
AAA_28
AAA_22
AAA_23
AAA
AAA_24
SRP54
AAA_30
AAA_7
PduV-EutP
Zeta_toxin
AAA_18
Arf
AAA_25
AAA_33
AAA_14
AAA_16
T2SSE
G-alpha
Motif
Other DBs
NCBI-GeneID:
110864972
NCBI-ProteinID:
XP_021969835
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Position
6:complement(23028434..23031264)
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AA seq
287 aa
AA seq
DB search
MDAESNSIKVNAMQFGYSGENPLFVNFNLNISARSRCLLVGANGSGKTTLLKILAGKHMV
GGKDVVRVLDFSSFHDTHLVCSGDLSYLGGSWTKTIGSAGEVPLQGDFSAEHMIFGVEGI
DPVRREKLIELLDIDLQWRMHKVSDGQRRRVQICLGLLHPFQVLLLDEVTVDLDVVARMD
LLEFFKEECEQRGATIVYATHIFDGLESWATDLAYIQDGELKRYEKLADLPEMNNSCNLL
SVVESWLRSETKNPKKKTVNPSNLIANKTSPFDSSPFRSSRHMAYYR
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagaatcgaacagtatcaaagtaaatgctatgcaattcggatacagtggcgag
aatcctctctttgtcaattttaacctcaacatctctgctcgatcccgttgtcttcttgtc
ggcgccaacggatctgggaagactactctgctgaagattttggccggaaaacatatggtt
ggggggaaagatgttgtgcgggtgctagatttttcatcttttcatgacacacacttggtt
tgtagcggtgatttgtcctacttgggtggatcttggaccaaaactattggttcggctgga
gaagtaccactacaaggagacttctctgcggaacatatgatatttggcgttgaaggtatc
gacccagttagaagagagaagctgattgaactgttggatattgatctacaatggcgtatg
cataaagtttccgatgggcaaagacgtagagtacaaatctgcttaggcctccttcatcct
ttccaggttcttttgttagacgaagtgacagttgacctcgatgtggttgcaaggatggat
ttactcgagttcttcaaggaggaatgtgagcagagaggagctacgatcgtatacgcaaca
catatatttgatggtctagagtcatgggcaacagatttggcctacatacaagacggagag
ttaaaaagatacgagaagttggcagatcttccggaaatgaacaactcctgcaacctgcta
tcagtggtcgagtcctggctccgttccgagaccaaaaatccgaaaaagaaaaccgtcaat
ccttcgaacttaatcgctaacaaaacgtccccgtttgattcttccccttttagatcatca
aggcacatggcatactatagatga
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