Helianthus annuus (common sunflower): 110867879
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Entry
110867879 CDS
T05101
Name
(RefSeq) 5'-3' exoribonuclease 4 isoform X1
KO
K20553
5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
han00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
110867879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110867879
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
110867879
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
PIN_2
Motif
Other DBs
NCBI-GeneID:
110867879
NCBI-ProteinID:
XP_021972624
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All DBs
Position
7:complement(70529739..70538662)
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AA seq
984 aa
AA seq
DB search
MSLYPWLVKRYPNTLCSVVEDHSSLDTSKPNPNGVEFDNLYIHLTDIIHTCFHPGGLPAP
QSYDGIFHFVLEYIHRVFSIVRPRKLLYLALDGVAPRAKMNYQRIRRFRAAKEAARKRTG
KPEGDKLDSNVITPGTEFMDLLSCALRYFVYCRMNRDPGWRGIKVILSDSTVVGDGACKI
MSYIRSQRNLPGYDPNTRHCLYGVDADLIMLALATHEIHISILRPMKGINVGKKYRKTEL
PYSECMKGLMIDLKFELFNIWVLREYLEKELVPNVEGTDFDCLIDDFVFMCVFVRNDFLP
RLPSLDVSMGGIELLLVVYQQEFAKMGYLTNAPEVNLKSTEHFLQALSSHENTILMKRSQ
KEKRKKRDFQDLHNQLKIVERDIISAPNPNTEDGVELTIDEVKIHDSDMEYKHYTMKFDC
ESHDIDRIKRHAVLKYTEGLCWFMHYYYYQQVPSWQWFYPYHYAPLASDFCGLDKLEINF
TLDQPFKALDQLLAVLPAASAQALPLFYRELMTNESSPISDFYPKADAKFDRDGKRRAWQ
DVSKLPFIDESRLLSEIMKVEHTLTDEEKQRNRFGRDMLFVHSSHPLAEMIKDLPSSDTS
SEVQIHIRPDLSDGMNGDLCISDKPVLPTDIPSPFVDKPAVKMNCVKSVDYKYPSHAHIP
KLPCGVIMPPRILRRRDWPSPPIVWHAFQSQRPTKKRKQDDKNCVLEDDGKQQNHKNGKS
EAQFVVEGSQNHLTAEKSTNHTEAQQQQAGMSDGMCRDHKQVKETEDEKLIDVAFTAGDG
EPKRKHKKKKQKQLDAQQEVQADGHEEGGDAPQGINNMVNSVEDPTARTQSSNNQQAPHV
ALKLTKRRRAKTEMVLINGGGGENKMESPAAAEAVGGENSTNKMDGVGDGPKDLVVGQMK
DYFQVSEEKANKKTRKKVKNENDESKASDVSTEQEKESSKRRKKHKSKSKNVEIPGNSPR
AEEQEATEKKEAVTESEPTQEAAE
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtatccatggctggttaagagataccctaacacactctgctccgttgtcgaa
gatcactcgtctctcgacaccagtaaacctaaccctaacggcgtcgaattcgacaacctt
tacatccacttgactgatattattcatacatgttttcaccctgggggcctgcctgcacct
cagtcatacgatggtattttccactttgttttggagtacattcacagagtattctccatt
gttagaccacggaagcttctgtatcttgcacttgacggtgttgcaccacgagcgaagatg
aattatcaaaggataaggcgtttcagagctgctaaagaagcagctcgtaaaaggactggt
aaaccagaaggtgataaactggattcaaatgtgattacacctgggacggagttcatggat
ctgttgtcttgtgctctcaggtattttgtgtactgtagaatgaatagggaccctggatgg
cgaggcatcaaggtgattctttccgactcaacggtggtaggtgatggggcgtgtaagata
atgtcatatatcaggtctcaaaggaatttacctggatatgatccaaatacgaggcactgt
ttatatggagtggatgcagacttgatcatgcttgcattggcaacccatgaaatccacatc
tctatcctgaggccaatgaagggcataaacgttgggaagaagtatagaaagacggagcta
ccatattctgaatgtatgaaaggattaatgattgatttgaaatttgagctattcaacata
tgggtactgagggaatatctagagaaagagctggttccaaatgtggagggaacagatttc
gactgcctcattgatgattttgtcttcatgtgcgtttttgttaggaatgattttttgccc
cgtttgccatcattggatgtatccatgggtggaattgaattgctcctggtggtctatcaa
caggaatttgctaaaatgggctatctgaccaatgcacctgaggtgaatttgaaaagcacg
gagcactttcttcaagccttaagttcccatgagaacactattcttatgaaacgcagccag
aaggagaagagaaagaagagagactttcaagatttgcacaatcaactcaagattgtggag
cgtgacatcataagtgcacccaatcctaatactgaggatggtgttgaattaacaatcgac
gaggttaaaatacatgacagtgatatggagtacaaacactatactatgaaatttgattgt
gaaagtcatgacattgatagaattaaaagacatgcagtcttaaaatacactgaaggtctc
tgctggttcatgcattattattattatcaacaagtaccttcgtggcaatggttttatccg
tatcactatgcaccacttgcttcagatttttgtggtcttgataagctggagattaacttc
acacttgaccagcctttcaaggcgttagatcagctactggctgtcttacctgcagcaagt
gcacaggcacttcctttgttttacagggaattaatgacaaacgagtcttcccctatctcg
gacttctatcctaaagcagatgctaagtttgatagggatggaaaaaggcgtgcttggcag
gatgtaagtaagttaccatttattgacgagtctcgtcttctttctgagattatgaaggtg
gagcatactttaacggatgaagaaaagcaaagaaataggtttggccgagacatgctattt
gttcactccagtcaccccttagcggaaatgataaaggatcttccttcaagtgatacaagt
tcagaggtacaaatccacattaggccagacctcagtgacgggatgaatggagatttgtgc
atttctgataaacctgtgcttcctactgatataccttcaccttttgttgacaagccggca
gtgaagatgaattgcgtaaaatcagtcgattacaagtatccttcccatgctcacattcct
aagctcccctgtggcgtaataatgcctcctaggattctaagacgccgagattggcctagt
ccacctattgtttggcatgcattccaatctcaacgtcccactaagaaacggaaacaggat
gataagaattgcgtactggaagatgacgggaagcagcagaaccataaaaatggaaaatca
gaggctcaatttgtagttgaggggagtcaaaaccatttgactgctgaaaagtcaacaaac
cacacagaggctcagcaacaacaagctggtatgagtgatggaatgtgtagagatcacaag
caggtaaaggaaacagaagatgagaaattgatcgacgttgcgtttactgcaggagatggg
gagcctaaaagaaagcataaaaagaagaaacagaagcagcttgacgctcaacaagaagta
caggctgacgggcatgaagaagggggtgacgcgccccagggtattaacaatatggttaac
agtgttgaagacccgacagccagaacacaatcatctaacaatcagcaagcaccccatgtt
gcactcaagcttacaaagaggagacgtgctaaaactgagatggtgttgataaatggaggg
ggaggtgaaaacaaaatggaatctccggctgctgctgaggcagttggtggtgaaaactca
acaaacaagatggatggtgtcggcgatggaccaaaagatttagttgttggacaaatgaag
gattattttcaagttagtgaggagaaagcaaacaagaaaacgaggaagaaagtgaagaat
gaaaatgatgaaagcaaagcaagtgatgtttctactgagcaagaaaaagaatctagtaaa
agaagaaaaaaacataagagtaaaagcaagaatgttgagatcccaggaaactctcccagg
gccgaggagcaagaagcaacagagaaaaaagaggcggtaactgagtctgaacccacacaa
gaggcagctgaatga
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