Helianthus annuus (common sunflower): 110872940
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Entry
110872940 CDS
T05101
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 isoform X1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
han03036
]
110872940
03400 DNA repair and recombination proteins [BR:
han03400
]
110872940
Chromosome and associated proteins [BR:
han03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
110872940
DNA repair and recombination proteins [BR:
han03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
110872940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
HATPase_c
FOG_N
Motif
Other DBs
NCBI-GeneID:
110872940
NCBI-ProteinID:
XP_021977538
LinkDB
All DBs
Position
8:complement(57949755..57959127)
Genome browser
AA seq
1614 aa
AA seq
DB search
MEGKRYLLTPQKRLSEGSEVWRSNKRTPDSGGVSSREVVSSSQPQRVYKLRILLPNGMTV
LVKIPEGTESITVRELANKVKEQHDRAIQAKKASSPKKSVKWHADLCFVDDYDYVYRNCL
KLTKLEMNKVHNLRLDDGSPPATIYENMWDLTPDTELLMELPEEYTFETALADLIDNSLQ
AVWANDESDERLISVEVSNEKISIFDTGPGMDSTSIEKWGKMGASLHRTYKTQAIGGKPP
YLKPAFGMFGYGGFIASMHLGRRTEVSSKTKNGKKVYMLRLERDALVNGSVSGSKATWRT
YGGLRDPTNDELELSPGGSFTKVEIFEPKMRSPNIRRLQFKLKDIYFPYIQCDDLSKKGR
TIMPVEFEVNREDLAEIPGGEVAITNLASCNGPEFVLQIHFKLNHDNATMTSSQGTRSSN
EANARLRCVYLPVKEGKESIDSIIETLKEDGYDYKEDFESFRHVSCRRLGRLLPDARWAW
LPFMDFRLKKIDRSQVFFKRSCMRVKCFIDTDAGFSPTPSKTDFAHQNPFTIALRNLGSK
EKDSDHTDPSTGVDIDIRRDGKSLNLTQLDKQYQLWVREMHDKYDEEVDSGIDEPVLIVN
PSNKKELHITSDVVRIHKAFRRKGKTWKSGQKIKILKGACAGFHKNNVYATLEYILLEGF
QGDAGGDAWIICRTIDISEKDGSLLESVEENPKFALRKSVSIPINVIDSGKCLAMDDSEW
NNQLEKQQQKCPSSIEILNARQCRELGIESSLPDGPETYAKDVSSFEIVAVVRPSTYKSG
TPSKHLEQKYMMKDKFEMSLVIAYCPNKKLQDAKNIYSGRVEPTSLKDLHGLYVFKPRCK
LHPLFQQVGIYIFTFSIRDSTCEKCVVKVQVKASREVHKWALSKKISHHNLTVGCPCNPI
SVSMFDKYDNRIPFLELPNISIKINCPNSTRIIINHCSPSISIDKLGLVIEDLVIESSDL
DNIRPSYDATMVLSLPENSHLDIPIKVLPGSVQDFTVQPENFEKQLIPGTIIKDLNLELF
DAYGNHVQENEKVGFSVDGFCWLDRSFSSKKVDAFGCIDLCGLLRVTGGYGRNVSLSICS
NKESISRVWQIEKRQLRISSQIPESCFAGSQLEHLEFEVVNSKGEVDVNFHDEDETGQSH
TLVIKSQSQFMDIEDSVKYVFRQGRCLVRAVPVPLETGEFTFVAAHSGCPDLQLTLKVLI
EPHSEMEPQPLNIRHSLNAISFMESETPITSKSPQQFTPEKMDICYAESRLLETDRESFR
EFRKDLEDDIHEIGLRIGKVEAEIRWLEDEQRQIEVNLSELEGIRDQILGIDSYGSLGKN
RILTRVESKSDCAASLVMKHLKGMRDQDRCGLMGNIIGIVALLGTTPTFELSRLFSEYLG
DQMLAVVCKHYEDVRLLESYQKNGKLNPDFALHMFARKLGQSINGRYLVLCIEDIRACEV
DKDVEGKLLFPDPTLPNGSTPAGFLGYAVNMINIDADHSDTKTDSGCGLRETLFYRLFGD
TQVYETRDDMKRAISCIKDGAISMDGGILRGNGAVSLGCLEPDIVFPVVPAKNRLSESDM
RLLKRYRELKLELKETIAMLVKKNKSRESDLKRFKERRDLYARYFTPRDLETCL
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtaaacggtatcttctaacgcctcaaaagcgactgagtgagggctctgaagta
tggcgatctaacaagaggacaccagattccggtggagtaagtagtagggaagttgtttcc
agttcacaaccacagagggtttacaagctgagaattctgttgccgaatgggatgactgta
ttggtgaagatacctgaaggaacggagtcgattactgttagagagcttgctaacaaagta
aaagagcaacatgatagagcaatacaagccaaaaaagcatctagccctaagaaaagtgtt
aaatggcatgctgatttgtgttttgttgacgattatgattatgtttatagaaattgcctc
aagttaacaaagttagagatgaacaaagtacacaatctcagacttgatgatgggtctcca
ccggcaacaatctatgagaacatgtgggatttaactcctgatacagagttgttaatggaa
ttaccagaagaatatacttttgaaaccgcattggctgatttgattgacaattctttgcaa
gcggtgtgggcgaacgatgaaagtgatgagaggctaataagtgttgaagtttcaaatgag
aagatatctatttttgacacaggtccgggtatggactctacgtctatagagaagtggggg
aagatgggtgcttctctccacaggacatataagacacaagccattggtggtaagcctcca
tatttaaagcctgcctttggcatgtttggatatggtggctttattgcatcaatgcattta
ggaaggcgcacggaagtttcatccaagaccaaaaatggtaaaaaagtctatatgttacgt
cttgagagagatgctcttgttaatggttctgtttctggttcaaaagcaacttggaggact
tatggtggccttcgagaccccacaaatgacgaacttgaattatctcccgggggaagtttc
acgaaggttgagattttcgaaccaaagatgagaagccccaacataaggcggcttcaattc
aaattaaaggatatttacttcccctatatacagtgtgatgacttatccaagaaagggaga
actattatgcctgttgaatttgaggttaacagagaggatctagcagaaattcctggcggg
gaggtagcaatcacaaatctagcttcatgcaatggtccagaatttgtgctacaaattcat
tttaaattaaatcatgacaatgctaccatgacaagtagtcaaggaacaagatcatcaaat
gaggcgaatgcacgcctaaggtgtgtatatctccctgttaaagagggcaaagaaagcatt
gatagtattattgaaacattgaaagaagacggatatgattacaaagaagacttcgaaagt
tttaggcatgtgtcttgtagacggttaggtcgtctgctaccagatgctcgttgggcatgg
cttccgtttatggatttcagactaaaaaagatagacagatcacaagtcttcttcaagaga
agctgcatgcgagttaaatgttttatcgatacggatgctggtttcagcccaacaccctct
aagactgatttcgcgcaccaaaacccttttactattgcattgaggaacttgggcagcaag
gagaaagattcggaccatacagatccatcaacaggcgtagacattgacatcagaagagac
ggaaaatcattgaacctcacacaattggataagcagtaccaactgtgggtaagggaaatg
catgacaaatatgatgaagaagtcgattctggaattgatgaacctgttcttatagtaaac
ccttcaaacaaaaaggagcttcatataaccagtgacgttgtgaggattcataaagctttt
aggcggaaaggaaaaacttggaaatctgggcagaaaatcaaaattctcaagggagcatgt
gctggattccacaagaacaatgtgtatgccacattagaatacatcctccttgaaggattt
caaggggatgctggtggggatgcgtggataatttgcaggacaattgacatctcagaaaaa
gatggctcgctacttgaatcggttgaagaaaatccaaaatttgctttgagaaaatccgta
tcaataccgataaatgtcattgattctggaaagtgtttggcaatggatgattctgaatgg
aataaccaactggagaagcaacagcagaagtgcccttcctcaattgagatcttaaatgca
aggcaatgtcgtgagttgggaatagaatcgtcattacctgatggacctgaaacttatgca
aaggatgtatcatcatttgaaatcgttgccgtggtgcgtccctctacttataaatctggg
actccctccaaacatttggaacagaaatatatgatgaaagataagtttgagatgtcacta
gtcattgcatattgtccaaacaagaagcttcaggatgcaaagaatatctattctggacgt
gtagaacctacatcattaaaagacttacatggcttgtatgtattcaaaccaagatgcaag
ttacatcctctgtttcagcaagttggcatttatatattcaccttttctattagagattca
acttgtgagaaatgtgtggtgaaggtccaagtgaaagcatcacgcgaagtccacaaatgg
gcactttccaagaagatttctcatcataatttaacggtgggttgtccatgcaatcccatt
tcggtatcaatgtttgataaatacgataatcgaattccgttcttggaacttccgaatata
tcaatcaagatcaactgcccaaacagtactaggattatcattaatcattgcagcccatct
atatcaatagataagttaggcctagtaatcgaggatttggttattgagagctctgatttg
gacaacattcgaccaagttatgatgccactatggtgttatctctgcctgagaactcacac
ttagatatccccatcaaagttcttcccggatctgtacaagatttcacagtgcaaccagaa
aactttgagaagcaactgattccaggcactataattaaggatttgaatttggagttattt
gatgcatacgggaatcatgtacaagaaaacgaaaaggtggggtttagtgtggatggcttt
tgttggttggatagatccttttctagtaagaaagtagatgcttttgggtgcattgatctt
tgtggcctgttaagagtaactggaggctatggaagaaacgtatcgctgtccatctgttcg
aataaagaatctattagcagagtgtggcagatcgagaaaaggcagctgaggatttcatca
cagatacccgaaagctgtttcgctggttcccaacttgaacacttggagtttgaagttgtg
aattccaagggtgaagtggatgtaaactttcatgatgaagatgagactggacaatcacat
actcttgtgatcaaatcacaatcacagtttatggatattgaagattctgtcaaatatgtg
tttcgacaaggccggtgcttagttcgtgcagttcctgttcctttagagacaggggagttt
acttttgttgctgctcactccggttgccctgatttacagttgacccttaaggttctcatt
gaacctcattcggagatggagcctcagcctctgaatataagacacagtttaaatgccatc
tcatttatggaatcagagacacctattacttctaagagtccccaacaatttactccagag
aaaatggatatatgctatgctgagtcaaggctactagaaactgacagagaatcatttagg
gaatttcgaaaggaccttgaagatgacattcatgaaatcggtttgcggattgggaaagtt
gaagcagaaattagatggctggaagatgagcaaagacaaattgaggtcaacctgtcagaa
cttgaaggtatcagggaccaaattcttggtattgactcatatggttcactggggaaaaat
agaatactaacacgggttgaatctaagtctgattgtgctgcttctctagtcatgaaacac
ctgaaaggaatgcgagatcaagatcggtgtggtttgatgggaaatatcatcgggattgtt
gcacttctaggaacaactcccacttttgagcttagcaggctattttctgagtatcttgga
gatcaaatgcttgcagtggtatgcaaacattatgaggacgtgcggttacttgagagctat
cagaagaacggaaagttaaatccagattttgcgcttcacatgtttgcaagaaaacttggt
cagtcgataaatggtcgctatcttgttctgtgcattgaagacataagggcatgcgaggta
gataaagatgttgagggaaagcttttgtttcctgatcctacacttcctaacggatccaca
ccggcaggctttttggggtatgctgtaaacatgataaatatagatgctgatcactcggac
accaaaacagactctggttgtggccttcgagagacattgttttatcgtctttttggtgat
actcaagtttatgaaaccagagacgacatgaaacgtgcaatatcatgcataaaagacggc
gcgatttccatggatggtgggattttaagaggcaatggcgccgtttctctaggatgcttg
gaaccagacattgttttccctgtagtacccgcaaaaaatcgactctctgagagtgacatg
cgattgctgaaacgttatagggaactgaagttggaacttaaagaaactattgctatgttg
gttaaaaagaataaatctcgtgagagtgatttgaaaaggttcaaagagagacgtgattta
tatgccaggtacttcactccgcgtgatttagagacgtgtttgtag
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