Helianthus annuus (common sunflower): 110886307
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Entry
110886307 CDS
T05101
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic isoform X1
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
110886307
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
han01007
]
110886307
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
han03016
]
110886307
Enzymes [BR:
han01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
110886307
Amino acid related enzymes [BR:
han01007
]
Aminoacyl-tRNA synthetase
Class I (U)
110886307
Transfer RNA biogenesis [BR:
han03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
110886307
Prokaryotic type
Other AARSs
110886307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
110886307
NCBI-ProteinID:
XP_021989786
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All DBs
Position
10:complement(163061534..163072137)
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AA seq
1177 aa
AA seq
DB search
MEDVSEGKDFSFPKQEEQILQWWTTTKAFETQLEKTKHLPEYIFYDGPPFATGLPHYGHI
LAGTIKDIVTRYQTMTGHHVTRRFGWDCHGLPVEHEIDVKLGIKSREDVLKMGIDKYNEE
CRSIVTRYVGEWEKVITRTGRWIDFKNDYKTMDLSFMESVWWVFSQLFKKNLVYRGFKVM
PYSTGCKTPLSNFEANSNYKEVPDPEIMVTFPIVDDQEGASFVAWTTTPWTLPSNLALCV
NASLVYVKVKSKSNGKIYVVAESRLSELPVEKPKKGTPNGAADEKTKGSSGKSKNSVVAY
EVLDKFPGSSLVGKKYVPLFDYFKDFSETAFRVVADDYVTSDSGSGIVHCAPAFGEDDYR
VCIENKIINKGENLVMPVDDDGCFTERITDFSGRYVKEADKDIIQAVKEKGRLVKSGSFT
HSYPFCWRSDTPLIYRAVPSWFVAVEKLKDQLLENNEKTQWVPSFVKEKRFHNWLENARD
WAISRSRFWGTPLPIWISKDGVDIEVIGSVEELEKRSGQKVTDLHRHKIDHITIPSPRGP
EFGELHRVEDVFDCWFESGSMPYAYIHYPFENKEYFNNNFPGHFVAEGLDQTRGWFYTLM
VLSTALFEKPAFRNLICNGLVLAEDGKKMSKRLKNYPSPMEVIDDYGADALRLYIINSPV
VRAEPLRFKKDGVYGVVKDVFLPWYNAYRFLVQNAKRLEVDGLEPFVPLDRATIINSANV
LDQWINSATQSLVHFVRQEMDAYRLYTVVPYLLKFIDNLTNIYVRFNRKRLKGRTGEKDC
RTALSTLYHVLLTCCKAMAPFTPFFTEVLYKNLRKVSNGSEESIHFCSFPEVEGKGGDRI
EQSVNRMMTIIDLARNIRERHNKPLKTPLKEMIVVHPDADFLDDIGGKLKEFVLEELNVK
SVVPCNDPLKYASLRAEPDFSVLGRRLGKSMKVVADAVKAMSQEDILSFEKIGEITIANH
VLKLSDIKIVRGFKRPDGMTEEQMDAASDGDVLVIIDLQRDDSLLEAGFAREVVNRIQKL
RKKSALEPTDAVEVYFKSLDEDVSVSAEMLKSQEAYIKEALGSSLLQFSMIPKHAVIIAE
ETYKNISNSDFQITLSRAALVFNENAIVDLYAGNTKYAQALQVYLLSRDHSNLKSEFQHG
NGKITVSCIENQPAVDVVLGKHVHLTVGDYFASTKAL
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgttagtgaaggaaaggacttctccttcccaaagcaagaagaacagatcctg
caatggtggacaacaaccaaagccttcgaaacacagctcgaaaaaacaaaacacctaccg
gaatacatcttctacgacggtcctccatttgccaccggcctcccgcactacggccacatc
ttagccggaacaatcaaggacatcgtcacgcgctaccagaccatgaccggccaccacgtc
acgcgccgattcggttgggactgccacgggttaccggtggagcatgagattgatgtgaag
ttagggattaagagcagagaggatgtgttgaagatggggattgataagtataatgaggag
tgtaggagtattgttactagatatgttggggaatgggagaaggttattactaggactgga
aggtggattgattttaagaatgattataagactatggatttgagctttatggagagtgtt
tggtgggtgttttctcagttgtttaagaagaatttggtttacagagggtttaaggtgatg
ccatacagtactggctgcaagactccactgtccaattttgaggctaattcaaactacaag
gaagtgcctgatcctgaaattatggtgacgtttccgattgttgatgatcaagagggtgct
tcgtttgttgcatggacaaccacaccatggacacttcctagtaatctcgcactttgtgtc
aacgcaagtcttgtatatgttaaggtgaagagcaaatcgaatgggaaaatttatgtagtt
gctgaatctagattatccgagcttcctgttgaaaagccgaaaaaagggacacctaatgga
gctgcagacgaaaagacaaagggctcaagtggaaaatctaaaaattctgtcgttgcttat
gaagtgttggataaatttcctggatcttcactcgtggggaaaaagtatgtgccgttattt
gattacttcaaggatttctcagaaacagctttcagagttgttgcagatgattacgtaact
tcagatagtggatctggcatcgtgcattgtgcacctgcatttggtgaagacgattatcgt
gtttgtatcgaaaataaaataattaataagggagaaaatcttgtcatgccagttgacgac
gatggttgctttacggaaagaattactgatttcagtggtcgttatgtcaaagaggccgat
aaagatattattcaagcagtgaaggagaaaggcaggctggtgaaatccggaagctttact
cattcgtatccgttttgctggagatctgatactcctctcatctacagagcggttcccagc
tggtttgttgcagtagagaagctgaaagatcagttgctggagaacaatgagaaaacacaa
tgggttccttcttttgtaaaggaaaaacggtttcacaattggctagaaaatgcaagagac
tgggccattagtcgaagtaggttttggggcactcctcttcctatttggatcagtaaggat
ggtgtggatattgaagttatcggctctgttgaagaactcgaaaaacgttcagggcagaag
gtaactgacttgcatcgccacaaaattgatcacatcacaattcccagccctcgtggccca
gagtttggtgagcttcaccgtgtagaagatgtttttgactgctggtttgagagtgggtcc
atgccatatgcctatatccactacccatttgaaaataaagaatacttcaacaataatttt
ccaggacattttgttgccgagggcttagatcaaactcgtggatggttttacactctgatg
gtcctttctaccgcattatttgaaaagcctgcgtttagaaatctcatttgcaatggactt
gtgttggccgaggatggtaaaaaaatgagtaaaagattaaagaattatccttctcctatg
gaagtcatcgatgattacggtgctgatgcactacgattgtacattatcaattctccagta
gtacgtgcggaacctttacgtttcaaaaaggacggagtttatggtgtcgtgaaagatgta
ttcttaccatggtataacgcgtatagatttttggttcaaaacgcaaaaagacttgaggtc
gacggacttgaaccgtttgttcctcttgatcgagccactattattaactcggctaatgtg
ctcgaccagtggatcaactcagccactcagagtctggttcatttcgttagacaggaaatg
gatgcttatcgactttatacagtcgttccttatctcttgaagttcattgataatttaacc
aacatatacgtacggttcaatcgaaaaagacttaaaggtcgtaccggagaaaaggactgc
agaactgcactttccactctataccatgtgcttttaacttgttgtaaagcaatggctccg
ttcacaccgtttttcaccgaggttctttataaaaacttgagaaaagtatccaacggatca
gaggaaagcattcacttttgcagtttccctgaagtagaaggaaaaggaggcgatcgtatc
gaacaaagtgttaacagaatgatgacaattattgatcttgcacgtaatattcgcgagcgc
cacaacaaacctttgaaaactccactcaaggagatgatagttgtacatccagatgctgac
tttttagatgacattggtggcaaactgaaagagtttgtgttagaggagcttaatgttaaa
tctgttgtgccatgcaatgatcctttgaagtatgcttctttacgtgccgaacctgatttt
agcgtgttgggtagaagactgggaaagtcaatgaaagtagttgcagatgcagtgaaggca
atgtcacaggaagacattttatcttttgaaaaaataggagaaattactattgctaatcac
gtcttaaagctctctgatatcaagattgtgcgtggatttaaacgccctgatggcatgaca
gaagagcaaatggatgcagctagtgatggtgatgttttggttatcattgatttgcaacgt
gatgattcattgttggaagctggatttgcacgtgaggttgttaaccgaattcaaaagcta
aggaaaaaatccgcacttgaacccaccgatgcagtggaggtctacttcaaatcgttggat
gaagatgtatcagtttccgcagaaatgttaaaatcccaggaagcatacatcaaagaggca
cttggctcttctttactccagtttagcatgattccaaaacatgcagtaatcattgctgag
gagacctacaagaacatctcaaattctgactttcagatcactttgtcaagagcagcatta
gtatttaatgagaacgcaattgttgacttatacgcagggaatacaaagtatgcacaggca
ttgcaggtatatctgttgtcaagagaccacagcaatctaaagtcggaatttcagcacgga
aatggaaagattacggtgagctgcattgaaaaccagcctgctgttgatgtggtcttggga
aaacacgtgcacttgaccgttggtgattatttcgcaagcacaaaagctctttga
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