Helianthus annuus (common sunflower): 110916508
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Entry
110916508 CDS
T05101
Name
(RefSeq) RING-box protein 1a
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03420
Nucleotide excision repair
han04120
Ubiquitin mediated proteolysis
han04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110916508
04120 Ubiquitin mediated proteolysis
110916508
09124 Replication and repair
03420 Nucleotide excision repair
110916508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
han04121
]
110916508
03400 DNA repair and recombination proteins [BR:
han03400
]
110916508
Enzymes [BR:
han01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
110916508
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
110916508
Multi subunit type E3
SCF complex
Ring finger protein
110916508
Cul2 complex
110916508
Cul3 complex
110916508
Cul4 complex
110916508
Cul7 complex
110916508
Cul8 complex
110916508
Cul9 complex
110916508
DNA repair and recombination proteins [BR:
han03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
110916508
TCR (transcription coupled repair) factors
Cul4-CSA complex
110916508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
110916508
NCBI-ProteinID:
XP_022016917
LinkDB
All DBs
Position
16:10000457..10002354
Genome browser
AA seq
113 aa
AA seq
DB search
MDSDVAMIPAGDSSSLPGPSSKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIE
CQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atggattcagacgtagcgatgattcctgccggtgactcatcgagtcttccaggtccatct
tcaaagaaaccgaagcgttttgaaatcaagaagtggaacgccgtttctctttgggcttgg
gatattgtggttgacaactgtgcgatttgtagaaatcacatcatggatctatgtattgaa
tgtcaagctaatcaggctagcgctactagcgaagagtgtactgttgcttggggtgtctgc
aaccatgctttccattttcactgcattagccgttggctgaaaacacgtcaagtgtgccct
ctagacaatagcgagtgggagtttcagaaatacggtcactag
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