KEGG   Helianthus annuus (common sunflower): 110929694
Entry
110929694         CDS       T05101                                 
Name
(RefSeq) ATP-dependent helicase rhp16
  KO
K15083  DNA repair protein RAD16
Organism
han  Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:han00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:han03400]
    110929694
DNA repair and recombination proteins [BR:han03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NER4 complex
      110929694
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII zf-C3HC4_3 DEAD zf-C3HC4 zf-RING_5 zf-C3HC4_2 Prok-RING_4 zf-RING_UBOX zf-RING_6 zf-RING_2 zf-C3HC4_4 zf-C2HC_2
Other DBs
NCBI-GeneID: 110929694
NCBI-ProteinID: XP_022028565
LinkDB
Position
3:complement(104863906..104871469)
AA seq 783 aa
MEISDDENDGRLPLDFDMNESIHEGLDNAKVDEPERTEIDEETFRGWDMLQLFENKVELG
RDDLDKEDALKNKQEDTKPTLMWKVWEDENEKWLDHHRPENINSEHSDATADPSPDFVMT
LLRYQKEWLAWGLKQEESASRGGILADEMGMGKTVQAIALVLAKRALCRELDEPRVKTTL
VICPLIAVMQWVDEIDRCTTKGSNKVLAYHGPNRGKTLIEFSTYDFVITTYSIVESEYRK
NFMPPKESCEKCGKKFYANSLKIHVARFCNGIKTVKQSKQSKTAKVDDKNNKKGLSTFLH
SVKWTRIILDEAHYIKDKYGSTARAVFALESSYRWALSGTPLQNHVGELYSLVHFLQITP
YSYHFCRDCDCKVLEHTKDFSCPHCPHSSNRHFSWWNKYIALPIARNDGSGRVRGTHLLK
DKVLKCIMLRRTKKGRAADLTLPPRIISVRRDYLDSTEKDYYMSLKKDSQGQVNRYVEEG
TLMSNYGHIFSLLTRLRQAADHPYLVMYSKYAVGRTSNSKYSDERFCGLCHDATEDPVVT
SCEHLFCKSCLTEFSASFGQPACPSCSKPLTIDFSESHNDQEIQKAKSSLKGFKPSSILN
RIRLENFQTSTKIDALKEEIRCMFERDGSAKGIVFSQFTTFLDLIHYSLQKSGVKCVQLD
GSMTLDAREAAITRFINDGDCRIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQD
RVYRIGQYKPIRVVKFVIEDTIEKDILEMQEKRKLGFEGTVGGRNEALEKLSHNDLMQLF
LHV
NT seq 2352 nt   +upstreamnt  +downstreamnt
atggagatatcagacgatgaaaatgacggtaggttgccgttagattttgatatgaatgaa
tctattcatgaaggtcttgacaatgctaaggttgacgagccagagagaacggaaatcgat
gaagaaacttttagagggtgggacatgttacagttatttgaaaacaaggtcgaacttggt
cgtgacgatcttgataaagaagatgctttgaaaaacaaacaagaagatacaaaaccgaca
ttaatgtggaaagtatgggaagacgagaatgagaaatggcttgaccatcataggccagag
aatattaattcagaacattcggatgcgacagctgatccatcaccagattttgttatgacg
cttttacggtaccaaaaagaatggttagcatggggattaaagcaagaagaatctgcttca
cgaggtggaattcttgccgatgaaatgggaatggggaagaccgtgcaagctatcgctctt
gtactcgctaaacgagcactttgtcgtgaacttgatgaaccccgtgtcaagacaaccctt
gtgatatgcccattgatagctgtcatgcaatgggttgatgagattgatcgatgcaccaca
aaaggaagcaacaaagtactggcgtatcatgggcccaacagggggaaaacgcttattgaa
ttctctacgtatgattttgtcataactacctattctattgtggagagtgaatatcggaaa
aatttcatgccaccaaaagaaagttgtgagaagtgcgggaaaaagttttacgcaaactca
ctaaaaattcacgttgcacgtttttgtaacggtattaaaactgtgaagcaatcaaaacag
tccaaaactgctaaagtggatgataagaacaataaaaagggtttgagtacttttttgcat
tctgtaaaatggactcgcataattttggatgaggctcattacataaaagataaatatggt
agtactgcacgcgctgtttttgctttagaatcttcctatagatgggctttgagtgggacc
cctttacagaatcatgttggagaactctactcgctcgttcacttcttacaaataactcct
tattcttatcacttctgtcgcgactgtgattgtaaagttcttgaacatactaaagatttt
tcatgtccacactgtcctcattcatcaaatagacacttcagttggtggaacaaatatatc
gctcttcccattgcacgtaatgatggtagtggaagagttagaggtacgcatttgctaaaa
gataaggttttgaaatgcataatgttaaggcgtactaagaagggccgagcagctgatctt
acactcccccctagaataatttccgtgaggcgtgactatcttgatagtacagagaaggac
tattatatgtcactcaagaaggatagtcaggggcaagttaatagatatgttgaagagggg
acattgatgagcaactatggacatatctttagcctcctaacacgcctgcgacaggcagct
gatcatccttatcttgtgatgtactccaaatatgctgttggaaggacaagcaacagcaaa
tatagtgatgaacgattttgcggtttatgtcatgacgcaacagaagaccctgtggtcaca
tcatgtgagcatctcttctgtaagtcatgcctgactgaattttccgctagctttggtcaa
cctgcatgcccttcgtgttcaaaaccactcacgattgactttagtgaaagtcataatgat
caagaaattcagaaggctaaatcaagtttgaaaggatttaaaccatctagtattttaaac
cgaatccgtcttgagaatttccagacaagcacaaaaatcgacgctttgaaggaagaaatc
agatgtatgtttgaaagagacggttctgctaaaggaattgtattcagccagttcacaaca
tttcttgatctaatacactattctttgcagaagagtggtgtgaaatgtgttcagttagat
ggatccatgactttggatgcaagagaagctgcgattacgagatttatcaatgacggagac
tgcagaatcttcttgatgagcttgaaagcaggtggtgttgctctaaatctcacagttgcc
tcacatgtattcttgatggacccgtggtggaaccccgctgtggagcagcaagcccaagat
cgagtctatcgtatcggtcaatacaaaccaatcagggttgtgaagtttgtaatagaagac
acaattgagaaggatattctggaaatgcaggagaagaggaaattggggtttgaggggact
gttggtggccgtaatgaagctctggaaaagctaagccataatgacttgatgcaacttttt
ttgcatgtatag

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