Helianthus annuus (common sunflower): 110929694
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Entry
110929694 CDS
T05101
Name
(RefSeq) ATP-dependent helicase rhp16
KO
K15083
DNA repair protein RAD16
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
han03400
]
110929694
DNA repair and recombination proteins [BR:
han03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
110929694
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
zf-C3HC4_3
DEAD
zf-C3HC4
zf-RING_5
zf-C3HC4_2
Prok-RING_4
zf-RING_UBOX
zf-RING_6
zf-RING_2
zf-C3HC4_4
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
110929694
NCBI-ProteinID:
XP_022028565
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Position
3:complement(104863906..104871469)
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AA seq
783 aa
AA seq
DB search
MEISDDENDGRLPLDFDMNESIHEGLDNAKVDEPERTEIDEETFRGWDMLQLFENKVELG
RDDLDKEDALKNKQEDTKPTLMWKVWEDENEKWLDHHRPENINSEHSDATADPSPDFVMT
LLRYQKEWLAWGLKQEESASRGGILADEMGMGKTVQAIALVLAKRALCRELDEPRVKTTL
VICPLIAVMQWVDEIDRCTTKGSNKVLAYHGPNRGKTLIEFSTYDFVITTYSIVESEYRK
NFMPPKESCEKCGKKFYANSLKIHVARFCNGIKTVKQSKQSKTAKVDDKNNKKGLSTFLH
SVKWTRIILDEAHYIKDKYGSTARAVFALESSYRWALSGTPLQNHVGELYSLVHFLQITP
YSYHFCRDCDCKVLEHTKDFSCPHCPHSSNRHFSWWNKYIALPIARNDGSGRVRGTHLLK
DKVLKCIMLRRTKKGRAADLTLPPRIISVRRDYLDSTEKDYYMSLKKDSQGQVNRYVEEG
TLMSNYGHIFSLLTRLRQAADHPYLVMYSKYAVGRTSNSKYSDERFCGLCHDATEDPVVT
SCEHLFCKSCLTEFSASFGQPACPSCSKPLTIDFSESHNDQEIQKAKSSLKGFKPSSILN
RIRLENFQTSTKIDALKEEIRCMFERDGSAKGIVFSQFTTFLDLIHYSLQKSGVKCVQLD
GSMTLDAREAAITRFINDGDCRIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEQQAQD
RVYRIGQYKPIRVVKFVIEDTIEKDILEMQEKRKLGFEGTVGGRNEALEKLSHNDLMQLF
LHV
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggagatatcagacgatgaaaatgacggtaggttgccgttagattttgatatgaatgaa
tctattcatgaaggtcttgacaatgctaaggttgacgagccagagagaacggaaatcgat
gaagaaacttttagagggtgggacatgttacagttatttgaaaacaaggtcgaacttggt
cgtgacgatcttgataaagaagatgctttgaaaaacaaacaagaagatacaaaaccgaca
ttaatgtggaaagtatgggaagacgagaatgagaaatggcttgaccatcataggccagag
aatattaattcagaacattcggatgcgacagctgatccatcaccagattttgttatgacg
cttttacggtaccaaaaagaatggttagcatggggattaaagcaagaagaatctgcttca
cgaggtggaattcttgccgatgaaatgggaatggggaagaccgtgcaagctatcgctctt
gtactcgctaaacgagcactttgtcgtgaacttgatgaaccccgtgtcaagacaaccctt
gtgatatgcccattgatagctgtcatgcaatgggttgatgagattgatcgatgcaccaca
aaaggaagcaacaaagtactggcgtatcatgggcccaacagggggaaaacgcttattgaa
ttctctacgtatgattttgtcataactacctattctattgtggagagtgaatatcggaaa
aatttcatgccaccaaaagaaagttgtgagaagtgcgggaaaaagttttacgcaaactca
ctaaaaattcacgttgcacgtttttgtaacggtattaaaactgtgaagcaatcaaaacag
tccaaaactgctaaagtggatgataagaacaataaaaagggtttgagtacttttttgcat
tctgtaaaatggactcgcataattttggatgaggctcattacataaaagataaatatggt
agtactgcacgcgctgtttttgctttagaatcttcctatagatgggctttgagtgggacc
cctttacagaatcatgttggagaactctactcgctcgttcacttcttacaaataactcct
tattcttatcacttctgtcgcgactgtgattgtaaagttcttgaacatactaaagatttt
tcatgtccacactgtcctcattcatcaaatagacacttcagttggtggaacaaatatatc
gctcttcccattgcacgtaatgatggtagtggaagagttagaggtacgcatttgctaaaa
gataaggttttgaaatgcataatgttaaggcgtactaagaagggccgagcagctgatctt
acactcccccctagaataatttccgtgaggcgtgactatcttgatagtacagagaaggac
tattatatgtcactcaagaaggatagtcaggggcaagttaatagatatgttgaagagggg
acattgatgagcaactatggacatatctttagcctcctaacacgcctgcgacaggcagct
gatcatccttatcttgtgatgtactccaaatatgctgttggaaggacaagcaacagcaaa
tatagtgatgaacgattttgcggtttatgtcatgacgcaacagaagaccctgtggtcaca
tcatgtgagcatctcttctgtaagtcatgcctgactgaattttccgctagctttggtcaa
cctgcatgcccttcgtgttcaaaaccactcacgattgactttagtgaaagtcataatgat
caagaaattcagaaggctaaatcaagtttgaaaggatttaaaccatctagtattttaaac
cgaatccgtcttgagaatttccagacaagcacaaaaatcgacgctttgaaggaagaaatc
agatgtatgtttgaaagagacggttctgctaaaggaattgtattcagccagttcacaaca
tttcttgatctaatacactattctttgcagaagagtggtgtgaaatgtgttcagttagat
ggatccatgactttggatgcaagagaagctgcgattacgagatttatcaatgacggagac
tgcagaatcttcttgatgagcttgaaagcaggtggtgttgctctaaatctcacagttgcc
tcacatgtattcttgatggacccgtggtggaaccccgctgtggagcagcaagcccaagat
cgagtctatcgtatcggtcaatacaaaccaatcagggttgtgaagtttgtaatagaagac
acaattgagaaggatattctggaaatgcaggagaagaggaaattggggtttgaggggact
gttggtggccgtaatgaagctctggaaaagctaagccataatgacttgatgcaacttttt
ttgcatgtatag
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