Halobacterium salinarum NRC-34001: LJ422_02470
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Entry
LJ422_02470 CDS
T07949
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hanr
Halobacterium salinarum NRC-34001
Pathway
hanr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hanr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LJ422_02470 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hanr03400
]
LJ422_02470 (nth)
Enzymes [BR:
hanr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LJ422_02470 (nth)
DNA repair and recombination proteins [BR:
hanr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LJ422_02470 (nth)
Prokaryotic type
LJ422_02470 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
DUF2400
Motif
Other DBs
NCBI-ProteinID:
UEB92529
LinkDB
All DBs
Position
complement(453344..454027)
Genome browser
AA seq
227 aa
AA seq
DB search
MGTRLETRSAQVGTVIDRLREQHPDPEISLRFSSRMELLVAVILSAQCTDERVNAETEHL
FDTYETVADYANADEEALAAELNSITYYNSKAGYIKSAAQSILEDHDGAVPDTMSDLTDL
SGVGRKTANVVLQHGHDLTQGIVVDTHVQRLSRRLGITEKKRPEAIETDLMPVVPEDHWK
NYTHWLIAHGRETCTARNPDCGACVLADICPSSKTDHDIDLADGSEW
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgcgactggagacgcgaagcgcacaggtcgggaccgtcatcgaccggctgcgc
gagcaacaccccgacccggagatctcgctgcggttctcctcacgcatggagctgctcgtg
gcggtgatcctgtccgcacagtgcactgacgagcgcgtcaacgccgagaccgaacacctc
ttcgacacctacgagaccgtcgcggactacgcgaacgccgacgaggaagcgctggctgcg
gaactgaactcgatcacgtactacaacagcaaagccggatacatcaaaagcgccgcacag
tcgatcctcgaagaccacgacggcgcagtacccgacaccatgagcgacctcacggacctc
tcgggtgtcggtcggaagacggccaacgtcgtcctccagcacggccacgatctgacccag
ggcatcgtcgtagacacccacgtgcagcggctgtcccggcggctcggcatcaccgagaaa
aagcgcccggaagccatcgaaaccgacctgatgccggtcgtgcccgaggaccactggaag
aactacacgcactggctgatcgcgcacggccgggaaacgtgtacggcccggaacccggac
tgcggggcgtgcgtgcttgcggacatctgtccgtcgtcgaagaccgaccacgacatcgac
ttggccgacggaagcgagtggtga
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