Halobacterium sp. NMX12-1: ABSL23_07750
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Entry
ABSL23_07750 CDS
T10641
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hanx Halobacterium sp. NMX12-1
Pathway
hanx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hanx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABSL23_07750 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hanx03400
]
ABSL23_07750 (nth)
Enzymes [BR:
hanx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ABSL23_07750 (nth)
DNA repair and recombination proteins [BR:
hanx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABSL23_07750 (nth)
Prokaryotic type
ABSL23_07750 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
AP_endonuc_2
EndIII_4Fe-2S
DUF2400
Motif
Other DBs
NCBI-ProteinID:
XCF17888
UniProt:
A0AAU8CG48
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All DBs
Position
1192745..1193608
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AA seq
287 aa
AA seq
DB search
MDDEPAENISGGDAAAGRFTEFEPGDGTSRAEAVVDRLGDMYWQKAYGGRDAFECLVRTI
LSQNTSDKASQPAHDALMDRYDPGDPADRPASDDDRDGAGSRGDGDLAAALAAAHQDELA
ETISSAGLYNQKSETIIRIAGRVCEEYGGEDEFDAFVRTGDPDEVRAALLDMKGVGPKTA
DCVLLFAGGRNGVFPVDTHVHRIARRLGLAAPDADHEGVREALEADVPGEKCGFGHTAMI
QFGREYCSAREPACLDGPEACPLYDLCDRVGVDELAEEVVDPAEAAD
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgaacccgcggagaacatctccggcggcgacgccgccgccggccggttcacg
gagttcgagcccggcgacggcacgagccgcgcggaagccgtcgtcgaccgcctcggcgac
atgtactggcagaaggcctacggcggacgggacgccttcgagtgcctcgtccgcacgatt
ctcagtcagaacaccagcgacaaggccagccagccggcgcacgacgcgctgatggacagg
tacgaccccggcgaccccgccgaccgccccgcctccgacgacgaccgggacggcgcgggc
tcccggggtgacggcgacctcgcggcagcgctcgcggccgcccaccaggacgaactcgca
gagaccatctcgtcggcgggcctctacaaccagaagtccgagacgataatccgcatcgcg
ggccgcgtctgcgaggagtacggcggtgaggacgagttcgacgcgttcgtacgcaccggc
gaccccgacgaggtgcgggcggcgctgctggacatgaagggagtcggcccgaagaccgcc
gactgcgtgctgctgttcgcgggcggccgcaacggcgtcttccccgtggacacgcacgtc
caccgcatcgcgcggcggctcggactcgcggccccggacgccgaccacgagggcgtccgc
gaagctctcgaagccgacgttccgggcgagaagtgcggcttcgggcacacggcgatgatt
cagttcggccgcgagtactgctcagcgcgcgagcccgcgtgtctcgacggcccggaggcg
tgcccgctgtacgacctctgcgacagggtcggcgtggacgaactcgcggaggaagtcgtc
gaccccgccgaggccgccgactag
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