Halobacterium sp. NMX12-1: ABSL23_08630
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Entry
ABSL23_08630 CDS
T10641
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hanx Halobacterium sp. NMX12-1
Pathway
hanx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hanx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABSL23_08630 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hanx03400
]
ABSL23_08630 (nth)
Enzymes [BR:
hanx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ABSL23_08630 (nth)
DNA repair and recombination proteins [BR:
hanx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABSL23_08630 (nth)
Prokaryotic type
ABSL23_08630 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
EndIII_4Fe-2S
Ogg-HhH
Scm3
Motif
Other DBs
NCBI-ProteinID:
XCF15316
UniProt:
A0AAU8C914
LinkDB
All DBs
Position
1353396..1354079
Genome browser
AA seq
227 aa
AA seq
DB search
MGTPLDTREAQVEEVIDRLEEAYPEPEISLNFSNRLELLVAVILSAQCTDERVNKETADL
FEKYESVEDYANADEDELAEDLNSITYYNSKAGYIKSAAQAILEDHDGEVPDTMSELTDL
SGVGRKTANVVLQHGHDITEGIVVDTHVQRISRRLGITEEERPEAIEEDLMGVVPREHWQ
NFTHWLISHGRDTCTARNPDCSDCLLEDVCPSSKLQHDVDLADGSEW
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgggaacaccgctggacacgcgcgaggcgcaggtcgaggaggtcatcgaccgcctcgaa
gaggcgtaccccgagcccgagatctcgctgaacttctcgaaccgcctcgaactgctcgtc
gccgtcatcctctccgcgcagtgcaccgacgagcgcgtgaacaaggagaccgccgacctc
ttcgagaagtacgagtccgtcgaggactacgcgaacgccgacgaggacgaactcgccgaa
gacctgaactccatcacgtactacaacagcaaggccggctacatcaagagcgccgcgcag
gccatcctggaggaccacgacggcgaggtgccggacacgatgagcgaactcaccgacctc
tcgggcgtcggccggaagaccgcgaacgtcgtcctccagcacggccacgacatcacggag
ggcatcgtcgtggacacgcacgtccagcgcatctcgcggcgcctcggcatcaccgaggag
gagcgcccggaggccatcgaggaggacctgatgggcgtcgtcccgcgcgagcactggcag
aacttcacgcactggctcatcagccacggccgggacacgtgcaccgcgcgcaacccggac
tgttcggactgcctcctcgaagacgtctgtccgtcctcgaagctccagcacgacgtcgac
ctcgccgacggcagcgagtggtag
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