Halobacterium sp. NMX12-1: ABSL23_11550
Help
Entry
ABSL23_11550 CDS
T10641
Symbol
fen
Name
(GenBank) flap endonuclease-1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
hanx Halobacterium sp. NMX12-1
Pathway
hanx03030
DNA replication
hanx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hanx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABSL23_11550 (fen)
03410 Base excision repair
ABSL23_11550 (fen)
03450 Non-homologous end-joining
ABSL23_11550 (fen)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hanx03032
]
ABSL23_11550 (fen)
03400 DNA repair and recombination proteins [BR:
hanx03400
]
ABSL23_11550 (fen)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hanx04147
]
ABSL23_11550 (fen)
DNA replication proteins [BR:
hanx03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
ABSL23_11550 (fen)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
ABSL23_11550 (fen)
DNA repair and recombination proteins [BR:
hanx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
ABSL23_11550 (fen)
Exosome [BR:
hanx04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ABSL23_11550 (fen)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
SPEF2_D5
Motif
Other DBs
NCBI-ProteinID:
XCF15867
UniProt:
A0AAU8CAX2
LinkDB
All DBs
Position
1874780..1875763
Genome browser
AA seq
327 aa
AA seq
DB search
MGNADLRQLAVIEEVPFDELEGDVVAVDAHNWLYKYLTTTVQWTSDDVYTTGDGIEVANL
VGIVQGLPKFFEHDLTPVFVWDGGVTELKDDEVEARREQRERYEEQLEEAREAGEAIEAA
RLEARTQRLTETIHETSRELLNLLDVPQVEAPAEGEAQAAHMARVDDDVDYAGSDDYDCL
LLGSPVTLRQLTSKGDPERMDFQATLEKHDLTWEQLVDVGILCGTDFNEGITGFGPKTAL
KAIREHGDLWGVLDAEGEHVEYADRIRELFLNPDVTDDYDLDLDSSPDIDAAREYVIEEW
EVAADELERGFARIEDSVVQTGLDQWT
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgggtaacgcggacctccgacagctcgcggtcatcgaggaggtccccttcgacgagctg
gagggggacgtggtggccgtggacgcgcacaactggctgtacaagtacctcacgacgacc
gtccagtggaccagcgacgacgtgtacacgaccggcgacggcatcgaggtcgcgaacctc
gtcggcatcgtgcagggcctcccgaagttcttcgagcacgacctcacgccggtgttcgtc
tgggacggcggcgtcaccgaactcaaggacgacgaggtggaggcgcgccgcgagcagcgc
gagcgctacgaggaacagttggaagaagcacgcgaagcgggcgaggccatcgaggcggcg
cgcctcgaagcgcgcacgcagcggctcacggagaccatccacgagacctcccgcgaactc
ctgaacctgctggacgtgccgcaggtcgaggcgcccgcggagggcgaggcgcaggccgcg
cacatggcgcgcgtggacgacgacgtggactacgcgggcagcgacgactacgactgcctc
ctgctcgggtcgccggtgacgctgcgccagctcacgagcaagggcgaccccgagcgcatg
gacttccaagccacgctggagaaacacgacctgacgtgggagcagctcgtggacgtcggc
atcctctgcggcacggacttcaacgagggcatcacgggcttcggcccgaagaccgcgctg
aaggccatccgtgaacacggcgacctctggggcgtcctcgacgcggagggcgagcacgtc
gagtacgccgaccgcatccgcgagctgttcctgaaccccgacgtcaccgacgactacgac
ctcgacctcgactcgtccccggacatcgacgccgcccgcgagtacgtaatcgaggagtgg
gaggtcgccgccgacgaactcgaacgcgggttcgcccgcatcgaggacagtgtcgtccag
accggcctcgaccagtggacgtga
DBGET
integrated database retrieval system