KEGG   Halobacterium sp. NMX12-1: ABSL23_11550
Entry
ABSL23_11550      CDS       T10641                                 
Symbol
fen
Name
(GenBank) flap endonuclease-1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
hanx  Halobacterium sp. NMX12-1
Pathway
hanx03030  DNA replication
hanx03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hanx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ABSL23_11550 (fen)
   03410 Base excision repair
    ABSL23_11550 (fen)
   03450 Non-homologous end-joining
    ABSL23_11550 (fen)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hanx03032]
    ABSL23_11550 (fen)
   03400 DNA repair and recombination proteins [BR:hanx03400]
    ABSL23_11550 (fen)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hanx04147]
    ABSL23_11550 (fen)
DNA replication proteins [BR:hanx03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    ABSL23_11550 (fen)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     ABSL23_11550 (fen)
DNA repair and recombination proteins [BR:hanx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     ABSL23_11550 (fen)
Exosome [BR:hanx04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   ABSL23_11550 (fen)
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc SPEF2_D5
Other DBs
NCBI-ProteinID: XCF15867
UniProt: A0AAU8CAX2
LinkDB
Position
1874780..1875763
AA seq 327 aa
MGNADLRQLAVIEEVPFDELEGDVVAVDAHNWLYKYLTTTVQWTSDDVYTTGDGIEVANL
VGIVQGLPKFFEHDLTPVFVWDGGVTELKDDEVEARREQRERYEEQLEEAREAGEAIEAA
RLEARTQRLTETIHETSRELLNLLDVPQVEAPAEGEAQAAHMARVDDDVDYAGSDDYDCL
LLGSPVTLRQLTSKGDPERMDFQATLEKHDLTWEQLVDVGILCGTDFNEGITGFGPKTAL
KAIREHGDLWGVLDAEGEHVEYADRIRELFLNPDVTDDYDLDLDSSPDIDAAREYVIEEW
EVAADELERGFARIEDSVVQTGLDQWT
NT seq 984 nt   +upstreamnt  +downstreamnt
atgggtaacgcggacctccgacagctcgcggtcatcgaggaggtccccttcgacgagctg
gagggggacgtggtggccgtggacgcgcacaactggctgtacaagtacctcacgacgacc
gtccagtggaccagcgacgacgtgtacacgaccggcgacggcatcgaggtcgcgaacctc
gtcggcatcgtgcagggcctcccgaagttcttcgagcacgacctcacgccggtgttcgtc
tgggacggcggcgtcaccgaactcaaggacgacgaggtggaggcgcgccgcgagcagcgc
gagcgctacgaggaacagttggaagaagcacgcgaagcgggcgaggccatcgaggcggcg
cgcctcgaagcgcgcacgcagcggctcacggagaccatccacgagacctcccgcgaactc
ctgaacctgctggacgtgccgcaggtcgaggcgcccgcggagggcgaggcgcaggccgcg
cacatggcgcgcgtggacgacgacgtggactacgcgggcagcgacgactacgactgcctc
ctgctcgggtcgccggtgacgctgcgccagctcacgagcaagggcgaccccgagcgcatg
gacttccaagccacgctggagaaacacgacctgacgtgggagcagctcgtggacgtcggc
atcctctgcggcacggacttcaacgagggcatcacgggcttcggcccgaagaccgcgctg
aaggccatccgtgaacacggcgacctctggggcgtcctcgacgcggagggcgagcacgtc
gagtacgccgaccgcatccgcgagctgttcctgaaccccgacgtcaccgacgactacgac
ctcgacctcgactcgtccccggacatcgacgccgcccgcgagtacgtaatcgaggagtgg
gaggtcgccgccgacgaactcgaacgcgggttcgcccgcatcgaggacagtgtcgtccag
accggcctcgaccagtggacgtga

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