Halomonas sp. NyZ770: LG409_13015
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Entry
LG409_13015 CDS
T10914
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
hany Halomonas sp. NyZ770
Pathway
hany01501
beta-Lactam resistance
hany01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hany00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LG409_13015
01503 Cationic antimicrobial peptide (CAMP) resistance
LG409_13015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hany03036
]
LG409_13015
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hany02000
]
LG409_13015
01504 Antimicrobial resistance genes [BR:
hany01504
]
LG409_13015
Chromosome and associated proteins [BR:
hany03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LG409_13015
Transporters [BR:
hany02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LG409_13015
Antimicrobial resistance genes [BR:
hany01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LG409_13015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
HH_MFP_RND
Beta-barrel_RND
RND-MFP_C
BSH_CusB
BSH_CzcB
HH_AAEA_pHBA
YknX_C
Beta-barrel_RND_2
HH_EMRA
CzcB_C
BSH_LcnD
Iml2-TPR_39
RskA_C
Motif
Other DBs
NCBI-ProteinID:
UDM06298
LinkDB
All DBs
Position
complement(2811075..2812355)
Genome browser
AA seq
426 aa
AA seq
DB search
MKRVMHSTRASLVTLIAVLALTACGQEQPSQEQQGQQQEAPPHAVEVAEVSRQDIPLNKS
YPSLLRSDSEVTLVARVNGFLEERHFEPGQMVEEGDRLYTIEPDLYQATVNQREADLQSA
RAELARAQRDAQRFEQLLSQNSVSRQQYDQALAEQRVAQASVAQAEAALTSANLDLGYSN
VTAPVSGMISLSQINVGNLVTSGTELATITPLDPLEVRFQLPQRDAFELRRQLADSAGDM
SSITAHLSVPGLAGSAGGELAGRLNFLGSRVDTGTSTVQASATFDNPDGEVLPGQFVRVR
LEGLKRFDVMAVPEIAVTQGLMGPRVFVLDDESKARERTVQLGDVAGPWQIILDGLEPGE
RVVVGDPAGLEPGMVIDPVRFDGDAEQLVDDVEEAEAQEQQEQAEAAAEMSEGAGDAPAE
GEEGAQ
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagagtgatgcactccacccgggcgagcctggtgacgctgatcgccgtgctggcg
ctgaccgcttgtggccaggaacagccgtcccaggagcagcagggccagcagcaggaagcg
ccaccccacgcggtggaagtcgctgaagtaagccgtcaggacattccgctcaacaagtcc
tatccttcgctgctgcgtagcgacagtgaagtcacgctggtggcgcgggtcaacggcttt
ctggaagagcggcatttcgaacccgggcaaatggtcgaggagggagatcgcctctacacc
atcgagccggacttgtaccaggccacggtgaaccagcgtgaagcagacctgcagagcgcc
cgggcagagctggcacgcgcccagcgggatgcgcagcgtttcgagcagctgctgagccag
aactcggtcagccgccagcagtacgaccaggcgctggcagagcagcgggttgcgcaggcc
agcgtggcacaggcggaagccgcactcaccagtgccaatctggacctgggctactccaac
gtcaccgcgcccgtttcgggcatgatcagcttgagccagatcaacgtgggcaacctggtc
acgtcaggcactgagctggccaccatcacgcctctggacccgctggaagtgcgctttcag
ctaccccagcgcgatgccttcgagctgcgtcgtcagttggccgacagcgccggtgacatg
tcctccattaccgcccatctcagcgtgcccgggttggcgggtagcgccggtggtgagctg
gcgggccgcctgaatttcctcggttcccgcgtggataccggcaccagtacggtgcaagca
tcggccacgttcgacaatcctgacggggaagtactgccgggccagttcgtgcgcgtacgc
cttgaaggcctgaagcgcttcgacgtcatggcggtgcctgaaattgccgttacccaaggg
ttgatgggccctcgtgtcttcgtgctggacgacgaaagcaaggcgcgtgagcggacggtt
caactgggcgatgtggctggcccctggcagatcatcctggatggcctggaacctggcgag
cgcgtcgtggtgggcgacccggcgggtctcgagccgggcatggtgatcgacccggtgcgt
ttcgatggcgatgcagaacagctggtcgatgacgtggaagaagccgaagcgcaggagcag
caggagcaggccgaagcggctgccgagatgtccgaaggcgccggtgatgcgcccgcggaa
ggggaagagggtgctcaataa
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