Herminiimonas arsenicoxydans: HEAR0799
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Entry
HEAR0799 CDS
T00490
Symbol
nth
Name
(GenBank) Endonuclease III (DNA-(apurinic or apyrimidinic site) lyase)
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
har
Herminiimonas arsenicoxydans
Pathway
har03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
har00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HEAR0799 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
har03400
]
HEAR0799 (nth)
Enzymes [BR:
har01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HEAR0799 (nth)
DNA repair and recombination proteins [BR:
har03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HEAR0799 (nth)
Prokaryotic type
HEAR0799 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
H2TH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
CAL60992
UniProt:
A4G3A5
LinkDB
All DBs
Position
complement(810803..811453)
Genome browser
AA seq
216 aa
AA seq
DB search
MNAEKRREIFNRLRAANPHPTTELEYQTPFQLLIAVLLSAQATDVSVNKATRKLYPHAGT
PRKIYALGVEGLMPYIQTIGLYRTKAKNVIETCRILIAEHGGEVPRTRAALEALPGVGRK
TANVVMNTAFGEPTIAVDTHIFRVANRTGIAPGKNVDIVEQKLMKFVAPEFRHDAHHWLI
LHGRYTCIARTPKCWNCIIADLCEYKQKTPLPAKGV
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcggaaaaacgccgtgaaattttcaaccgactgcgcgctgccaatccgcatccc
actaccgaacttgaataccagacgccattccagttactgatcgcggtcttgctgtcggcg
caggcaaccgacgtttccgtcaacaaggccacgcgcaaactgtatccgcacgccggtacg
ccaaggaaaatttatgcgctgggcgtggaaggcttgatgccctacatccagaccataggc
ttgtatcgcaccaaggcgaaaaacgtcattgaaacttgccggatattgatcgccgaacat
ggcggtgaagtgccgcgtacgcgtgcagcgctggaagccttgcccggcgtcggccgcaag
accgccaacgtggtgatgaatacagccttcggcgaaccgaccatcgccgtcgatacgcac
atctttcgcgtcgcgaatcgcaccggcattgcgccgggcaagaacgtcgatatcgtcgag
cagaaactgatgaaatttgtcgcgccggaattccggcacgacgcccatcactggctgatc
ctgcacggccgctatacctgcattgcgcgcacgcccaaatgctggaattgcatcattgcc
gatttatgtgaatacaagcagaagacgcccttgcccgccaaaggcgtctag
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