Haliotis asinina (tropical abalone): 137256579
Help
Entry
137256579 CDS
T10448
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component-like
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137256579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hasi03041
]
137256579
Spliceosome [BR:
hasi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
137256579
Complex C
U5 SnRNP specific factors
137256579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
Roc
MMR_HSR1
Septin
Motif
Other DBs
NCBI-GeneID:
137256579
NCBI-ProteinID:
XP_067650550
LinkDB
All DBs
Position
11:41230560..41253509
Genome browser
AA seq
973 aa
AA seq
DB search
MDADLYDEFGNYIGPELDSDDDDDDDEDDRDDEEYMDRDDDDDGDHDDMDDQPEMAVVLH
EDKKYYPTAEEVYGPDVETIVQEEDTQPLTEPIIAPVKKKKFSMAEQDLPETTYNMEFLA
DLMDSPELIRNVTLCGHLHHGKTSFVDCLLEQTHPDIQGRADKDMRYTDTLFTEQERGVS
IKSTPITVVMQDTKNKSYLVNVFDTPGHVNFSDEATAAMRLSDGVVIFVDAAEGVMLNTE
RLIKHALHEKLAITICINKIDRVILELKLPPTDAYYKLRNILDEINGIISMYSEEEDGLM
MSPLLGNVCFASSYYRFCFTLKSFGKIYADTYGGINEKEFARRLWGDIYFNSKTRKFTKK
PAHNTSQRSFVEFILEPLYKIFAQIVGDVDECLPRVCDELGIHLTKEEQKLNIKPLMRLI
GRRFFGDFTGFVDMCVEHISSPVQNAKSKIEHIYTGPADSELAEEMSHCDPDGPLMIHTT
KLFPTSDGTSFHVFGRVLSGTLYSNQEVRILGENYTLQDEEDSRFGQVGRLWIAEARYKV
EVNRVPAGNWVLIEGIDQPIVKTSTITDTSSNEEVYIFRPLKFNTSSVIKIAVEPVNPSE
LPKMLDGLRKVNKSYPLLTTKVEESGEHIILGTGELYLDCVMHDLRKMYSEIDIKVADPV
VSFCETVVETSSLKCFAETPNKKNKLTMIAEPLEKGLAEDIENEVVQITWPRKKLGEFFQ
TKYDWDLLAARSIWAFGPDAMGPNILVDDTLPSEVDKSVLGLVKDSIVQGFQWATREGPL
CDEPIRNVKFKILDAMIAGEPIHRGGGQIIPTARRVAYSAFLMATPRMMEPYNFVEVMAP
ADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFLPAIDSFGFETDLRTHTQGQAFCLS
VFHHWQIVPGDPLDKSIIIRPLEPQPATHLAREFMIKTRRRKGLSEDVSINKFFDDPMLL
ELAKQDVMLNYPM
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagatttgtatgacgagtttggcaactatattggccctgaactagacagtgat
gatgatgacgatgatgatgaagatgatcgtgatgatgaagaatacatggacagagatgat
gatgacgatggtgatcatgatgacatggatgaccagccagagatggctgtggtactgcac
gaggacaagaagtactaccctacagcggaggaggtgtatgggccggatgtggagactatt
gtacaagaagaggacacgcaacctttaacagaacctatcattgctcctgtgaagaagaaa
aagttttccatggctgagcaagatcttccagaaactacttacaatatggagtttctggct
gatttgatggactctccagaactgatacgaaatgtcacactttgtggacacctccatcat
ggaaaaacgtcgttcgtggactgcctgctggagcagacacaccccgacatccagggccga
gcagacaaggatatgcgatacactgacactctattcacagagcaggagcggggcgtcagc
atcaagtcgacgcccatcacagttgtgatgcaggacacaaagaacaagtcgtacttggtc
aacgtctttgacacgccaggacatgtgaacttctcagatgaggctacagctgccatgagg
ctgagtgatggtgtcgtcatttttgtcgacgctgcagaaggagtgatgttgaatacggag
cggcttatcaaacatgcactccatgaaaaacttgccatcaccatatgtatcaacaagatt
gaccgcgtcatcctggagctaaaactgccccctactgatgcctattacaagcttcgcaac
atcctggatgagatcaacggtatcatcagcatgtactcagaggaggaggatggactgatg
atgtcgccgttgctgggcaacgtctgcttcgccagctcctactaccgtttctgcttcaca
ctcaagtcctttggcaagatctatgctgacacatacgggggcatcaatgagaaggagttt
gctcgcagactgtggggagacatttatttcaacagtaaaacgaggaagtttacaaagaaa
ccagcccacaacacgtcccagaggagctttgtggagttcatacttgaacccctttacaag
atatttgcccagattgtcggggatgttgatgagtgtctcccgcgagtgtgtgacgagctc
ggcatccacctcactaaagaagagcagaaactcaacatcaaacctctgatgagactcatc
ggacgccgcttcttcggagacttcacaggttttgttgatatgtgtgtggagcacatcagc
tcgcccgtccagaatgcgaaaagtaaaatcgaacacatctacactggcccagcagactct
gagctggcagaggaaatgtctcattgtgacccagatggcccgttgatgatccacaccaca
aaactgttcccaacgtcagatggtaccagctttcacgtgtttggtcgagtgttgagtgga
actctctactccaaccaggaagtgaggatacttggagagaactacacactacaagacgag
gaggattcacgtttcggacaagtcggacgtctttggattgctgaagcaaggtataaagtg
gaggtgaaccgagtaccagcagggaactgggtgttgatagaaggcatcgaccagccaatt
gtgaagacctccaccatcacagacacttccagtaacgaggaggtgtatatattccgccct
ctcaagttcaacacaagctctgtgatcaagatcgcagtggagccagtgaatccgtctgaa
ctgccaaaaatgttggacggtctgagaaaggtcaacaagagttatcccctccttaccaca
aaggttgaggagtcaggtgaacacatcatcctggggactggggagctgtacctggactgt
gtgatgcacgacctccgcaagatgtactccgagatagacatcaaggtcgctgacccggtt
gtgtccttctgtgagacggtggtagaaacatcatcactcaagtgcttcgctgaaacaccc
aacaaaaagaataaattgacaatgattgcggagcccctggagaaggggttggcggaggac
attgagaatgaggtagtgcaaatcacatggcccaggaagaagctgggagagttcttccag
acaaaatacgactgggatttgctggctgctcgatctatctgggccttcgggccagacgca
atggggccaaacattttggttgatgatactttgccatctgaggtggacaagtcagtactg
ggtttggtgaaggacagcatcgtgcagggattccagtgggcaacaagagaagggccactg
tgtgatgaacctatccgtaatgtgaagttcaagatcctggatgccatgattgccggggag
ccgatacacagaggtggcggtcagatcatccccacagccagaagagtggcctactctgcc
ttcctcatggccacaccacgtatgatggagccctacaactttgtggaggtgatggcgcct
gctgactgtgtgtctgctgtgtacacagtgctagcaaagaggagaggtcatgtgacccag
gatgcccctgttcctggatctccgctgtacacaatcaaggctttcctccccgccattgac
tcatttggttttgagaccgatctgagaacacatacacaaggccaggctttttgtctctcg
gtcttccatcactggcagatcgtgcctggcgatcccctggacaagtccatcatcatccgg
cccctggaaccacagcctgcaactcatctcgcccgggagttcatgatcaagacacggaga
cgcaagggtctgagcgaggatgtatccatcaacaagttcttcgacgaccctatgttgctg
gagttggccaaacaggacgtgatgctgaactacccgatgtag
DBGET
integrated database retrieval system
