Haliotis asinina (tropical abalone): 137284496
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Entry
137284496 CDS
T10448
Name
(RefSeq) TNF receptor-associated factor 6-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi04120
Ubiquitin mediated proteolysis
hasi04140
Autophagy - animal
hasi04144
Endocytosis
hasi04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
137284496
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
137284496
04140 Autophagy - animal
137284496
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
137284496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hasi04131
]
137284496
04121 Ubiquitin system [BR:
hasi04121
]
137284496
Enzymes [BR:
hasi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137284496
Membrane trafficking [BR:
hasi04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
137284496
Ubiquitin system [BR:
hasi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
137284496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-TRAF
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-Nse
TRAF3_RING
SKA1
Bul1_C
RING_XB3-XBAT31
zf-TRAF_2
Motif
Other DBs
NCBI-GeneID:
137284496
NCBI-ProteinID:
XP_067672421
LinkDB
All DBs
Position
5:7235379..7242522
Genome browser
AA seq
325 aa
AA seq
DB search
MSHEEVSVGEIHGFDHDFDPQVDRKYQCPICLAVLREAVQTSCGHRFCEECLKGVIKART
CAKCPVDNRWFRVRGEVFPDIATRREILSLTVKCDYSKGDDRCQWKGELRELQEHKDTCQ
MAPIPCEYSCGLTVTRGEVAVHMATCRRRPVACDHCQITLALADRPMHHLLECEKFPVTC
TVCGAVGILRKNIPDHIEQDCPLVEVKCTFHRLGCKAEEKRQNLEKHNKECWQQHLALMA
ENELHLRSEMQKLRITVESLSNDVEDLKDLAVRQEVIMKVQRRQIRKLRGESASDAVSTT
SDEDVNDAATNTITMELDDDSGNIS
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagtcacgaggaggtcagtgttggggagatccacggctttgaccatgactttgatccg
caagtagaccggaagtaccagtgtccgatctgtctggccgtgttacgggaagcagttcag
acttcatgtggtcacaggttctgcgaagagtgtctgaaaggcgtcatcaaggcaagaacg
tgtgccaagtgtccagtagacaacagatggttcagagttcgaggggaagtgtttcccgac
atcgccacacgacgtgaaatcttgtccttgacagtcaagtgcgactacagcaaaggcgat
gaccgatgtcagtggaagggcgaactccgagaactccaggagcacaaagacacctgccaa
atggccccaataccttgcgagtacagttgtggactgacggtgacccgaggcgaagtggcc
gtccacatggcgacttgcaggagaaggccggtcgcgtgtgaccactgccagatcacattg
gcactagctgacagaccgatgcaccacctgctggagtgtgaaaagttcccggtgacgtgt
acggtgtgtggagctgtcggcattctccggaagaacatcccggaccacatcgagcaggac
tgccctctggtagaggttaaatgtaccttccacagactagggtgcaaggccgaggaaaag
cggcagaacctggagaagcacaacaaagagtgctggcagcaacacctggccttgatggcc
gaaaacgagctccatctgcgctctgagatgcagaagttacgaatcacagtcgagtctctc
tctaacgatgtggaagatcttaaagatctggccgtgagacaagaagtcatcatgaaggtg
caacgtcgacagatacgaaaacttcgtggcgaatccgcaagtgatgctgtttcaaccacg
tcggacgaagacgtcaacgatgcagcgacgaacaccatcacaatggagctagatgacgac
agtggtaacatctcgtga
DBGET
integrated database retrieval system
