Halorhabdus sp. SVX81: SVXHr_1011
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Entry
SVXHr_1011 CDS
T09281
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hasv
Halorhabdus sp. SVX81
Pathway
hasv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hasv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SVXHr_1011 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hasv03400
]
SVXHr_1011 (nth)
Enzymes [BR:
hasv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SVXHr_1011 (nth)
DNA repair and recombination proteins [BR:
hasv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SVXHr_1011 (nth)
Prokaryotic type
SVXHr_1011 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
Noelin-1
HHH_8
IMS_HHH
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
WEL17185
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All DBs
Position
1026073..1026759
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AA seq
228 aa
AA seq
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MGTPLEPRSAQATEVIDRLHDAYPDTTISLTFSNRLELLVAVVLSAQCTDERVNETTPDL
FETYQTPEDYAAAEEGELAEDIYGITFHNNKAGYLKGIGERLVEEHDGEVPDTMDALTDL
PGVGRKTANVVLQHGHDVVEGIVVDTHVQRLTRRLGLTEEERPDAIEDDLMEIIPEDEWQ
VFTHLMISHGRAVCTARNPDCGECELEDVCPSSKRDSDVDLASGKDWE
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgggaacgccgctggaaccgcgttcggcacaggccacggaagtcatcgaccgattgcac
gacgcctaccccgataccacaatttcgctcaccttctcgaaccggcttgaactgctcgtc
gccgttgtcctctcggcacagtgtaccgacgagcgcgtcaacgaaacgacgccggacctc
ttcgagacgtaccagacgcccgaagactacgccgccgcggaggaaggcgaactcgccgag
gacatctacggcatcaccttccacaacaacaaagcggggtatctgaaggggatcggcgag
cgcctcgtcgaggagcacgacggcgaggtgccggacacgatggacgcgctgaccgacctt
ccgggcgtcggtcggaagaccgcgaacgtcgtcctccagcacggtcacgacgttgtcgag
ggaatcgtcgtcgacacacacgtccagcggctcacccgtcgcctggggctcaccgaggag
gagcggcccgacgccatcgaggacgatctgatggagatcatccccgaagacgagtggcag
gtattcacccacctcatgattagccacggccgagcggtctgtacggcgcggaatcctgac
tgtggggagtgtgaactcgaagatgtttgtccctcctcgaaacgcgacagtgacgtggat
cttgcgagcggcaaggactgggagtga
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