Halorhabdus sp. SVX81: SVXHr_1874
Help
Entry
SVXHr_1874 CDS
T09281
Symbol
nth2
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hasv
Halorhabdus sp. SVX81
Pathway
hasv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hasv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SVXHr_1874 (nth2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hasv03400
]
SVXHr_1874 (nth2)
Enzymes [BR:
hasv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SVXHr_1874 (nth2)
DNA repair and recombination proteins [BR:
hasv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SVXHr_1874 (nth2)
Prokaryotic type
SVXHr_1874 (nth2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
DUF5361
HHH
HHH_5
TetR_C_36
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
WEL18036
LinkDB
All DBs
Position
1897538..1898398
Genome browser
AA seq
286 aa
AA seq
DB search
MRSFLTLREPRRTMSEDAEPVENISGGPGSGGSMDTFEPSENETRAAKVVDRLGELYWQK
TYGGQDAFECLVRTILSQNTSDVASQPAHDALMDRYGSEEDEVDLVDALADAEQAELAET
ISGAGLHNQKSARIIEIAERVREEYGGEDDFDAFVREEPAEAVRETLLAMNGVGPKTADC
VLLFAGGRDGVFPVDTHVYRIYRRLGIAPPDADHEAVREVLEEKVPKGKCGFGHTASIQF
GREYCSAREPACLDGPEACPLYDLCDRVGIEPASGDVVDPVETVER
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcggtcgtttttgacgctgcgcgaaccaagacgaaccatgagcgaggacgccgaaccg
gtcgagaacatcagcggtggccccggcagcggcggctcgatggataccttcgagccgagc
gaaaatgagacgcgggctgccaaggtggtcgaccgcctgggcgaactgtactggcagaag
acctacggcggccaggacgccttcgagtgtctcgtccggacgatcctcagccagaacacg
agcgacgtggcgagccagccggcccacgacgcgttgatggaccgatacggatccgaggag
gacgaagtcgatctcgtcgacgccctcgccgacgccgaacaggccgaactcgcagagacg
atctccggggccggcctccacaaccagaagtccgcccggatcatcgagatcgccgagcgc
gtccgcgaggagtacggcggcgaggacgacttcgacgcgttcgtccgcgaggagcccgcc
gaggcagttcgggaaacgctgctcgcgatgaacggcgtcggccccaagaccgccgactgt
gtcctcctctttgctggtggacgcgacggcgtctttccggtcgacacgcacgtctaccgg
atctaccgccgcctcggtatcgccccgccggacgccgaccacgaggcagtccgcgaggtg
ctcgaagagaaagtgcccaaggggaaatgtggcttcggtcacaccgcgagcatccagttc
ggccgggagtactgcagcgcccgggagccggcgtgtctcgacggtcccgaggcatgcccg
ctgtacgatctgtgtgatcgcgtcggtatcgagccggcgagcggcgatgtcgtcgatccg
gtcgagacagtcgaacgttga
DBGET
integrated database retrieval system
