Halorhabdus sp. SVX81: SVXHr_1971
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Entry
SVXHr_1971 CDS
T09281
Symbol
rpoF
Name
(GenBank) DNA-directed RNA polymerase subunit F
KO
K03051
DNA-directed RNA polymerase subunit F [EC:
2.7.7.6
]
Organism
hasv
Halorhabdus sp. SVX81
Pathway
hasv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hasv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SVXHr_1971 (rpoF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hasv03021
]
SVXHr_1971 (rpoF)
Enzymes [BR:
hasv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SVXHr_1971 (rpoF)
Transcription machinery [BR:
hasv03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
SVXHr_1971 (rpoF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb4
RNA_pol_Rpb1_6
Motif
Other DBs
NCBI-ProteinID:
WEL18132
LinkDB
All DBs
Position
1981467..1981823
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AA seq
118 aa
AA seq
DB search
MTIFKEKLEEEYLTFAEAKGLLADIERERAADEDREMPYELTRAIEHANRFATLDIEESA
EFVEELLELEKVDEPTAYKIANLAPEDRDELRSIYAQERYTLSGDELDDILDVVAKYV
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcttcaaggaaaaactcgaagaggagtacctcaccttcgcggaagcgaagggg
ctgctcgccgacatcgagcgcgagcgggccgccgacgaggaccgggagatgccctacgaa
ctcacccgggccatcgaacacgccaaccgctttgcgacgctggacatcgaggagtcggcg
gagttcgtcgaggaactcctcgaactcgagaaggtcgacgagccgactgcgtacaagatc
gccaatctggccccggaagatcgggacgaactccgttcgatctacgcccaggaacgctac
acgctatcgggcgatgaactcgacgacattctcgatgtcgtcgcgaagtacgtctga
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