Hafnia alvei: AT03_18160
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Entry
AT03_18160 CDS
T03425
Symbol
lpxC
Name
(GenBank) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
hav
Hafnia alvei
Pathway
hav00540
Lipopolysaccharide biosynthesis
hav01100
Metabolic pathways
Module
hav_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
hav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
AT03_18160 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hav01005
]
AT03_18160 (lpxC)
Enzymes [BR:
hav01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
AT03_18160 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
hav01005
]
Lipid A
AT03_18160 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
AIU74128
UniProt:
A0A097R5W7
LinkDB
All DBs
Position
complement(3940230..3941147)
Genome browser
AA seq
305 aa
AA seq
DB search
MIKQRTLKRIIQATGVGLHTGKKVTLTMRPAAANTGVIYRRTDLNPPVDFPADAKSVRDT
MLCTCLVNEHDVRISTVEHLNAALAGLGIDNLIIEVDAAEIPIMDGSASPFVYLLLEAGI
EELNCAKKFLRLKQTVRVEDGDKWAELSPYNGFSLDFTIDFNHPAIDSSSQRYRMDFSAE
SFVRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVVDDYRVLNEDGLRFEDEFVRHKM
LDAIGDLFMCGHNIIGAFTAFKSGHALNNKLLQAVLAKQEAWEYVTFEDDAEMPIAFRAP
TTVLA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacaacggacattaaaacgtattattcaggcgactggtgtcggtcttcatacc
ggcaagaaggtcaccctgactatgcgcccagccgcggctaacaccggggtcatctatcgt
cgcactgacttgaatccaccggttgattttccggctgatgcaaaatccgtgcgtgatacc
atgctctgtacttgcctggttaatgagcatgacgtacgtatttctaccgtagaacattta
aacgctgctctggcaggtttaggtatcgacaacttaattattgaagttgatgcggcagaa
attcctatcatggatggcagcgccagtcctttcgtttatctgctgttagaagcgggtatc
gaagagctgaactgtgcgaagaaattccttcgcctgaagcagactgtgcgtgttgaagat
ggcgataagtgggccgaactgtctccgtataacggtttcagcttagactttactatcgac
ttcaatcatccagcgattgattccagctcacagcgttaccggatggatttctccgccgaa
tcgtttgtgcgccaaattagccgtgcgcgtacttttggttttatgcgcgatatcgaatat
ttacagtcccgtggtttgtgcctgggcggtagtttcgattgtgccatcgttgtggacgat
taccgcgttcttaacgaagatggcctgcgttttgaagacgaatttgttcgtcacaaaatg
ctggatgcgattggtgacttgttcatgtgtggacataacatcattggtgcattcaccgca
ttcaaatcaggtcatgcattgaacaacaaactgttacaagcagtattggctaagcaggaa
gcttgggaatacgtaacgtttgaagatgatgccgaaatgccaatcgcattccgcgcacca
acaacagttttggcttaa
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