KEGG   Helicoverpa armigera (cotton bollworm): 110374653
Entry
110374653         CDS       T05609                                 
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
  KO
K12852  116 kDa U5 small nuclear ribonucleoprotein component
Organism
haw  Helicoverpa armigera (cotton bollworm)
Pathway
haw03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:haw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110374653
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:haw03041]
    110374653
Spliceosome [BR:haw03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    110374653
 Complex C
   U5 SnRNP specific factors
    110374653
SSDB
Motif
Pfam: GTP_EFTU EFTUD2 EFG_C EFG_IV GTP_EFTU_D2 EFG_III EFL1 MMR_HSR1 Roc Ras
Other DBs
NCBI-GeneID: 110374653
NCBI-ProteinID: XP_063890962
LinkDB
Position
5:join(12848684..12848874,12849167..12849396,12849794..12850045,12850321..12850578,12850972..12851213,12851616..12851749,12852113..12852299,12853663..12853803,12854233..12854445,12854838..12854973,12855310..12855508,12855867..12856009,12857577..12857713,12858038..12858158,12858510..12858702,12859111..12859264)
AA seq 976 aa
MDGDLYDEFGNYIGPDLESDSDDEQSVYGQDNRDVDEDAMEEDEDGDAEPEAAPMSVVLH
EDKRYYPQAVEVYGPDVETVVQEEDTQALDKPLVEPIKHKKFQVQEQQLPETRYDMEYMA
DMLDNTNLMRNVTLMGHLHNGKTSFVDCLIRQTHPSTINTDTTIPMRYTDTLFVEQERGV
SIKSMPVTLLLKNIKGKSHLLNIMDTPGHVNFSDEVTAALRISDGAVLFVDAAEGIMLNT
ERLLRHAVQERVPLTLCINKIDRLILELKLPPADAYYKLRHIIDELNSMLETHQPQDNPD
EPATVFSPLLGNVCFASSLYDVCFSVESFAAMYAAAHPASGLRASDMSAWLWGDVYFNAK
TRRFTKKQPHASAQRSFVEFILEPLYKIFAQVVGDVDDTLPAVLSELGIKLTKQEAKLNV
RPLLRLVCSRFFGDFCGFVEMVVRHVPSPLDAAARKVAHTYRGASGALLDDMVACDQSGR
LVAHTTKMYPTDDCTFFLVLARIMSGTLYAGQTVRVLGENYSTQDEEDSRIMNVGRLWIY
EARYKVELNRVPAGCWALIEGIDQPIVKTCTVVSAEEDAELHTFTPLRFNTQAVVKIAVE
PVNPSELPKMLDGLRKVNKSYPLLSTRVEESGEHVILGTGELYLDCVMHDLRNMYSEIDI
KVADPVVSFCETVVETSSLKCFAETPNKRNKLTMIAEPLERGLAEDIEAGAVCVTWDRKR
LGEFFQTKYDWDLLAARSIWAFGPDSTGPNILVDDTLPSEVDKHLLASVKDSIVQGFQWG
TREGPLCEEPIRNVKFKILDAVIATEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYLF
VEVQAPADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFVPAIDSFGFETDLRTHTQG
QAFCLQVFHHWQIVPGDPLDKSIVIRPLEPQPATHLAREFMIKTRRRKGLSEDVSINKFF
DDPMLLELARQDVQLN
NT seq 2931 nt   +upstreamnt  +downstreamnt
atggacggtgatttatatgatgagttcggtaattacatcggcccggaccttgagtcggac
tccgacgatgaacagagtgtttacggacaagataacagagacgttgacgaagatgctatg
gaggaagatgaggatggtgatgcggagcccgaggcggcgcccatgtccgtagtactacac
gaagataaacggtactatcctcaagccgtagaagtatacgggccagatgtagagacagta
gtccaagaggaagacacgcaggctttagacaagcctctggtagagcctatcaagcacaag
aagttccaggtacaggaacagcagctcccggagacgagatatgacatggagtacatggct
gatatgctagataatactaacctcatgaggaatgttacgttgatgggacatttgcataat
ggtaaaacctcattcgtagactgtctaatcagacagacgcaccccagcaccataaacaca
gacacaacaatacccatgcggtacacggacacattgtttgtggagcaagaacgaggagtc
tctatcaagtctatgcctgtcacgctactgctcaagaatattaagggaaaatcacattta
ttgaacatcatggatacaccgggacatgttaactttagtgatgaagttactgctgctttg
aggatttctgatggtgctgtcctcttcgtggacgcagcagaaggcataatgctgaacaca
gaacgcctcctccggcacgcggtacaagagcgagttcccctaacgctctgcatcaacaag
attgaccgtctgatattggaactgaagctgccacccgcagacgcgtattacaagctgagg
catatcatcgatgagctgaactccatgttggagacgcaccagcctcaggataatccagat
gaacctgctactgtgttctcgcctttattgggtaacgtctgcttcgcttcctctctctac
gacgtttgctttagcgtggagtccttcgcggcgatgtacgcggccgcgcaccccgcctca
gggctccgcgcctccgacatgtctgcctggctgtggggcgacgtgtacttcaacgcgaag
actcgaaggttcactaagaagcagccccatgcatcagctcagaggagcttcgtggagttc
atcttggagccgctgtataagatttttgcacaggtggtaggcgacgtggacgacacatta
ccggcggtgctgtcggagttaggcatcaagctgacgaagcaggaagcgaagctcaacgtg
cgaccgctgttacgactcgtctgcagcagattctttggagatttctgcggcttcgtggag
atggtggtccgtcacgtgccgtccccgctggacgcggccgcccgcaaggtggcacacacg
taccgcggcgcgtcgggcgcgctgctggacgacatggtggcgtgcgaccagtcgggccgc
ctcgtcgcgcacaccaccaagatgtaccccaccgacgactgcaccttcttcctggtgcta
gctcgtattatgtcgggcacactatacgcggggcagactgtacgagtgctgggagagaac
tacagcacgcaggatgaagaagactcccggataatgaacgtgggccgactgtggatctat
gaagcgcggtataaggtggaactgaaccgcgtgccagcgggttgctgggctctcatcgag
ggtatcgaccagccgatagtgaagacctgcaccgtggtgtctgctgaagaagatgcggaa
ctgcataccttcacccctctgaggttcaatactcaagcagtcgtgaagatcgctgtggag
cctgttaatccgtcagagttgccgaagatgttggatggcttgaggaaggttaacaaatcg
tatcccctcttatcgactcgcgtggaagagtcaggcgagcacgtgatcctgggcactgga
gaactgtacctcgactgtgtcatgcacgacctcaggaatatgtactccgagatcgatatc
aaagtggctgacccagtggtctcattctgcgagaccgtagtagagacctcctcactcaag
tgcttcgccgagactcctaacaagaggaacaagctgactatgatagccgagcccctggag
cgagggctggccgaggacatcgaggccggagccgtctgcgtcacctgggacaggaagcgg
cttggagagttcttccagaccaaatacgactgggacttgttggcggcgcgttcgatctgg
gcgttcggtccggactccacaggacccaacatcctggtggacgacactctgccctcagag
gtcgacaaacacctgctcgcttccgtcaaagatagtattgtacaaggattccaatggggt
acgagagaaggtccgctatgcgaggagccgattcgcaacgtgaagttcaagatcctcgac
gcggtgatagcgaccgagccgctgcacagaggcggtggacagatcatacctactgctagg
agggtggcgtactcagcgttcctgatggcgacaccgcgtctgatggagccctatctcttc
gtggaggtgcaagcgcccgctgactgcgtctccgctgtatacacagtactggccaaacgg
agaggtcacgtaacccaagacgcgccagtccccgggtccccgctgtacacgatcaaggcg
ttcgtgcccgccatcgactcgttcggcttcgagaccgacctccgcacgcacacgcagggc
caggccttctgtctgcaggtcttccaccactggcagatcgtgcccggagaccccttggat
aagagcattgttataaggccactagaaccgcagcccgctacccacctggcgcgtgagttc
atgatcaagacccggcgccgcaaggggctcagcgaggatgtctccatcaacaagttcttc
gacgaccctatgttgttggagctggcgcgacaagacgtgcagttgaattaa

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