KEGG   Helicoverpa armigera (cotton bollworm): 110376758
Entry
110376758         CDS       T05609                                 
Name
(RefSeq) TAR DNA-binding protein 43
  KO
K23600  TAR DNA-binding protein 43
Organism
haw  Helicoverpa armigera (cotton bollworm)
Pathway
haw03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:haw00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    110376758
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:haw03019]
    110376758
Messenger RNA biogenesis [BR:haw03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Negative regulators of mRNA 3' end processing
     110376758
SSDB
Motif
Pfam: TDP-43_N RRM_1 RRM_PARP14_3 RRM_7 Nup35_RRM_2 PTP_N
Other DBs
NCBI-GeneID: 110376758
NCBI-ProteinID: XP_063890971
LinkDB
Position
5:complement(5708533..5709897)
AA seq 454 aa
MCSKSGNYNGDLFEYIKVSEDEDESNAVEIPCELDGTLLLSTLVAQFPGACGLKYRHPDS
KSIRGIRLSDGKLHPPSEVGWGKHLYICVFPKENKRKMEDVSPENSAAKTKRLEKKLTCS
DLICLGLPWKSTEESIKQYFEQFGEVVMVQLKRDKNGSFKGFGFIRFATYASQMRALAQR
HNIDGRWVDVRIPNSKEGVVPQMPCKVFVGRCTEDMTADDLREYFSKFGEVTDVFVPRPF
RAFGFVTFLDPEVAQSLCGEDHVIKGASVSVSSAAPKIKTKSQNWKDDSYGPNNWEGNRS
GGPSGGPSNNGGNSNIDSLNMQNLGINPNGGPPANFNLPISLVAAALNQAGWGGFLGGPG
NSGPNNWQGGPPQGNPGKNWNGNQNWGQNGPPQSWNQGGGSGGNQGWNGGGKSGGNWNQG
SWPNGQGNWNGNGNGGGGSSSGSGSGWNNNKPQT
NT seq 1365 nt   +upstreamnt  +downstreamnt
atgtgttccaagagtggcaactacaatggtgacttgttcgagtatatcaaagttagtgaa
gatgaagatgaatctaatgcggttgaaattccttgcgaattagatggtacactgttgctt
tcaactctcgtagcccaatttcccggggcttgtggactgaaatatcgacacccggatagc
aaatcaatccgagggattcgtctaagtgatggcaaactacatccacccagtgaagtaggt
tggggtaaacacctgtacatttgtgtatttcctaaagagaacaaacgtaaaatggaagat
gtttctccagagaattctgctgctaagaccaaacgcttagagaagaaactgacatgctca
gatttaatttgtttaggattgccctggaagtcaacagaagagtccattaagcagtatttc
gagcaatttggtgaagttgtaatggtgcaattgaaaagagataagaatggctcctttaaa
ggttttggttttattcgttttgctacttatgcatcccagatgagagctttagcccagagg
cataacattgatggccgctgggtagatgttcgtattcctaattcaaaagaaggcgtagtg
cctcagatgccctgcaaagtatttgttggaaggtgtactgaagatatgacagctgatgat
ttacgagaatatttctcaaagttcggagaagtaactgatgtgtttgttccacgtccattt
agagcatttggatttgttacatttttggatccagaagtagcacaaagtctttgtggagaa
gatcatgttataaagggagcttctgtatctgtatcaagtgcagcacccaaaattaagacc
aagtcccaaaactggaaagatgattcctatgggccgaataattgggagggcaaccgttca
gggggaccatctggtggcccaagcaacaatggcggaaatagtaacattgattctcttaac
atgcagaacttaggaatcaaccctaatggaggtccaccagctaacttcaatttacctata
agtttagtagctgcagcacttaaccaagcaggatggggtggatttttaggaggccctggt
aactctggtcccaataattggcaaggtggcccaccacaaggcaaccctgggaaaaactgg
aatggtaatcaaaattggggtcaaaatggaccaccacaatcatggaatcagggtggtggt
agtggtggcaaccaaggttggaatggtggtggcaaaagtggaggcaactggaatcaaggc
agttggccaaatggccagggcaactggaatggtaatggcaatgggggaggtggctccagt
tctggctctggaagtgggtggaacaacaacaagccccaaacatga

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