Halobacteriovorax sp. BALOs_7: BALOs_3026
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Entry
BALOs_3026 CDS
T05649
Name
(GenBank) DNA ligase (NAD+)
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
hax
Halobacteriovorax sp. BALOs_7
Pathway
hax03030
DNA replication
hax03410
Base excision repair
hax03420
Nucleotide excision repair
hax03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BALOs_3026
03410 Base excision repair
BALOs_3026
03420 Nucleotide excision repair
BALOs_3026
03430 Mismatch repair
BALOs_3026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hax03032
]
BALOs_3026
03400 DNA repair and recombination proteins [BR:
hax03400
]
BALOs_3026
Enzymes [BR:
hax01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BALOs_3026
DNA replication proteins [BR:
hax03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BALOs_3026
DNA repair and recombination proteins [BR:
hax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BALOs_3026
NER (nucleotide excision repair)
GGR (global genome repair) factors
BALOs_3026
MMR (mismatch excision repair)
DNA ligase
BALOs_3026
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BALOs_3026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
HHH_5
PTCB-BRCT
RNA_ligase
BRCT_2
DNA_ligase_ZBD
Nlig-Ia
HHH_2
DUF4619
PS_Dcarbxylase
Beta-prop_WDR35_TULP_N
NS1_C
Motif
Other DBs
NCBI-ProteinID:
AYF46007
UniProt:
A0AAD0WZG0
LinkDB
All DBs
Position
complement(3130514..3132403)
Genome browser
AA seq
629 aa
AA seq
DB search
MNKIKLLEDQIKYHKALYYRGEPEISDIAYDKIEDELREIDPDNPVLNLVGSTISSLEKV
KHDKKMLSLGKTYKIDELINWAKDYEVLGIYKVDGVSCSLIYENGKLVIGKTRGDGTFGE
NITQKVQWMKGVPSSIQDKERIEIRGEMYCDEESFFKLSEAMISQGLEKPTSQRNIVAGL
VGRKENINLCSFINFKAFDVLGIDFDKEEQKYHHLQEQGFDILEYEIMKSKKDFEASIED
AKDFMANGDYLIDGLVFVYNDIKLHHELGETAHHPRYKMAFKFPGETVQTILKSITWQVS
RNGILTPVGEVEPVSISGAVVSRVTLHNFGMVKQHNLKAGDKIEIIRSGEVIPKFLQTIK
ESENDFSVPTHCPSCDAPVKQVDIRIICDNPACPAQVKEVILNFIQKIGIDDLSSKRLEE
MIRRKLVTKIEDLYNLNIDKLIELNKVKEKLATKLLTSIEKSKKADLITFLSALGITGGA
YNKCEKVVEGGFDSIEKLLSMTAEQLQGLEGFAEKSATTFVNSLQEKKDLIKNLQEIGFT
FEVIENDTGSSLAGIKICITGSLSRKRSEIEKDIKAAGGTPVSSVSKNTDILLTNETEAK
SSKYKKALELGITIKTEDEVMGMINGQKE
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgaataagattaagttgttagaagatcaaataaagtatcataaagctttatattatcgc
ggtgaacctgaaataagtgatattgcttacgataaaatagaagatgagcttagggaaatt
gaccctgataatccggtcctaaatttagtaggttctactatatcgtcacttgaaaaggta
aagcatgataagaaaatgctctctcttggaaaaacatataagatcgatgaattaatcaat
tgggccaaggactacgaagtattaggaatttacaaagttgacggtgtttcatgttcactg
atttatgaaaatggaaaacttgttataggtaagactagaggagatggtacatttggtgaa
aatatcactcaaaaagtacaatggatgaaaggtgtccctagttccattcaagataaagag
agaatagaaattcgtggtgaaatgtattgcgacgaagagtcattttttaaattatctgaa
gcgatgatctcacaaggtcttgaaaaacctacttctcaacgaaatattgtggcaggactt
gttggccgtaaggaaaatataaacttatgttcttttattaattttaaagcatttgatgtt
ttaggaattgattttgataaggaagaacagaaataccatcatttacaagagcaaggattt
gatattctcgaatatgagatcatgaaatcaaaaaaagattttgaagcgtcgatagaggat
gcaaaagattttatggccaatggtgattatttaattgatgggttggtatttgtttataat
gatataaagctacatcatgaactcggtgagactgcccatcatcctcgttataaaatggcc
tttaagtttcctggtgaaacagttcaaacgatacttaagtcgattacttggcaggtctct
agaaatggtattttaactcctgttggagaagttgagcctgttagtatcagtggtgctgtc
gtttcacgtgttacacttcataactttggaatggtaaaacaacacaatctaaaagcaggt
gataagatcgaaattatccgcagtggtgaagttatacctaaatttctgcaaacaattaaa
gagtcagagaatgatttctctgtaccaacacattgtcctagctgtgatgctccagttaaa
caagttgatatacgaatcatttgtgataatccagcatgtccggcacaagtcaaagaagtt
atcttaaacttcattcaaaagataggtattgatgatttaagttctaagcgtctcgaggaa
atgattcgccgtaaattagtaacaaagattgaagatctttataatttaaatattgataaa
ttaattgaactaaataaagttaaagaaaaattggccacgaaacttttaactagtattgaa
aagtcaaagaaggctgatcttattacttttctttctgcactaggtattactggtggagcc
tataataaatgtgaaaaagttgttgaaggtggatttgactcaatcgagaagttgctatcg
atgacagcagagcaactacaaggcctagaaggatttgctgagaagtcagcaacgactttt
gttaattcattacaagaaaaaaaagatcttataaaaaacttacaagaaataggtttcaca
tttgaagtaatcgaaaatgatactggatctagcttggctggaataaaaatatgtattact
ggttctttatctcgaaaaagaagtgagattgaaaaagatataaaagcagctggtggaact
cctgttagttctgtaagtaagaatacagatattcttcttacaaatgaaactgaagctaag
tcttctaagtataagaaggcattagagttgggaattactattaagactgaagatgaagta
atgggaatgattaatggccaaaaagagtaa
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