Harmonia axyridis (harlequin ladybird): 123681047
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Entry
123681047 CDS
T10650
Name
(RefSeq) telomerase-binding protein EST1A isoform X1
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123681047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haxr03019
]
123681047
03032 DNA replication proteins [BR:
haxr03032
]
123681047
Messenger RNA biogenesis [BR:
haxr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
123681047
mRNA cycle factors
Common to processing body (P body) and stress granule
123681047
DNA replication proteins [BR:
haxr03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
123681047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
CBM87_Agd3
Motif
Other DBs
NCBI-GeneID:
123681047
NCBI-ProteinID:
XP_045475191
LinkDB
All DBs
Position
5:4590345..4674133
Genome browser
AA seq
1666 aa
AA seq
DB search
MKRRPHQKLYTPGSGSLRKSNYGIEESESDTNLVVNSKENRNQTYVDTKFKSEGNTPRNA
LHNTDNMMDKFSDLSIKDNSKRSRKPDMEIYIPRIVAQNKKPDQENGASRSRKRDDYSQE
KEIIGDNERNSFSHSNGNDKRFEPHFNDRFNSNKSKRYSNNRRRGSEQREFNDEWGERNN
HSRQVRQGSEPRNTDNLSRDQSNWPRTRDTRSMEHSGPPSSSSNYGDKPFPSKPPSGRRN
SIMSHEKMNELPPRFRKKMMEEGKLKNVNLQEEGWDGSSLTFQNTSSQHSSYASDNNYQS
GPGSYATLPNSHNVQHNHMSGQNYGFSTLPSKSSRGRGRFNYEQLDYGSVGRPVDLRSPC
HSRPSTPQSISGNYRDDAFGGPTSRPHTPSYNRRNDYNRNNEDHYHPSSRQSSQERNRRT
NFKDNYRQSDDYYQPRRNDDRYNMRSKDDSYQQNRSETRNNRRRNEHRDRRGRGDFRRDD
YRGPNSHDDRYNNDAVVSRDVSPERNAVSLPWEEVPTFERPSKPATPKPVEKTSATPEKD
GGIVFDWSEDVEKSSMLEQEALSDVPSRSSSVISLVDNSANQVSSQTNGNSLRKSKSKNR
KRDKRRRRSRSNMRDRSKERPNESESFDNFKVPSEPARRRPSRDSSFERFSRGSKIRSRE
GSFDRMRKSSTSECENWREEIRVRQEQEKEKDIKRNRNNSGTSDFQRSRQNSEDTQTKRR
SCDLSDIDVKKAGVLVIPPEHSQDAVTSSSPPSLNHPRYANASKQNVPHTRSLFDPNNPD
KPIIVKSSTSRVAPGIPENKEIIPPPAVYDMFGNICPAWYMEDSEENQMSHYREMIKDVK
RADQEIQYAIHSGIFLKNWSAVETFRQFLKESLQYFLGKDLKFSQTCNIEQHFWKLLYYN
IIERIRKASQEDEENKEDYKQFVLYLVDEGTQYFEGLLKFLEETYQFQLSDFLGANQAIP
QKGLGYIGLALISAQKILIFLGDLARYKEQINETMNFGKCRQWYIKAHEINPKNGRPYKQ
LAHLAVCARRKLDAVYYYVRSLMSSNPIYSSREKLTNLFYENSRKYEQGEKKRREEKLER
ARQYMKEKESDHNSKPKSLRKETWIRPDGGQRVHRTTQAVQKEDSEEENLLLLSSVEVNK
RFVISYLHVHGKLITKIGMDSFQDAALQMLKEFRALLQHSPLPLPTNRLLQLLALNMFAI
ESNQLKDPEQRLSGYRSEFQECALVVSLQMFNLILERCVSLLDEHLASKPEKLNEVSMDT
HVLLPPIKIWCDWMLCHSSVWNPPPSTQDYRVGAPVDPWTRLAMLINLLRQLDQTASSVF
SNEQLEGYELLRLPEDNVLSGFTPLMLKVDEPTYVPKNYDLESGQFVLRLNKLLFFGTEF
LCGLEPPVLKLEIDNDFTEYISVVSNANSRDSPQSVEEMNDQEVLVESYSDNESKISSIG
EDTSSEVRDLLTRKVELEKWHKRHQLHMERVEKILAQSIISVHIEVLPKYLVPDTNCFID
YLDEIETIIKVPNAPYTIMVPIVVLAELEGLGRGGISPASGTLSKNDPEHIRKVGEAARK
ALVLLKKRHHNIKCVTTKGAFLNTTTFTTEEDASTNSAKNDDKILTTCLNLSKSHMKEME
SKEGEPRQIYREVVLLTDDRNLRVKAHSTDVPVRELSDFMKWAGLG
NT seq
5001 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtaggccacaccaaaaattgtatactcctggaagtggttctttacgcaagtca
aattatggtattgaagaaagcgaatcagatacaaatttagttgttaattccaaggagaat
agaaatcaaacttatgttgatactaaatttaaaagtgaaggaaataccccaagaaatgct
ttgcataatactgacaacatgatggataagtttagtgatttgtcaattaaagataattct
aagaggagtaggaaaccagatatggaaatttacatccctagaatagtagctcaaaataaa
aaacctgatcaagaaaatggtgcttcaaggtcacgtaaaagagatgattactctcaagag
aaagaaataattggggataatgaaagaaactcttttagccattctaatggaaatgataaa
agatttgagccccatttcaatgatagatttaacagcaataaatctaagagatattcaaac
aacaggaggcgaggtagtgaacagagggaatttaatgatgaatggggtgaaagaaataat
cactctagacaggttagacaaggatccgaaccaaggaatacagataatttaagtagggat
caaagtaattggccaagaacaagagatactagaagcatggaacattcaggaccccctagt
tctagttctaattatggtgataaaccgtttccttcaaaaccaccaagcggaaggagaaat
agcatcatgagccatgagaagatgaatgaattacctccaagatttcggaagaaaatgatg
gaagaaggaaaactgaaaaatgtgaatttacaagaagaaggatgggatggtagtagtcta
actttccaaaacacaagcagccaacattcaagctatgcttcagataataattatcaatct
ggaccaggctcctatgccacccttcctaattcccataatgttcaacataaccacatgtct
ggtcaaaattatggattctctactttacccagcaaatctagtagaggaagaggtcgcttc
aattatgagcaacttgattatggttctgttggacgcccagttgatctgaggagtccttgt
cattctagaccatcgactccacagtctatcagcggaaattatagggatgatgcctttgga
ggacctaccagtagaccacatactccatcctataacagaagaaatgactacaataggaac
aatgaagatcactatcatccttcatctcgacaatcgtcgcaagagagaaatagaagaacc
aatttcaaggacaattatcgtcaatcggatgattattatcagccaagaagaaacgatgat
aggtataacatgcgtagcaaagacgattcctatcagcaaaatcgaagtgaaactagaaat
aataggaggcggaacgaacacagagatcgtagaggtcgaggtgattttaggagggacgat
tatagaggtccaaactctcatgatgataggtacaataatgatgctgtagtgagcagagat
gtatctcctgaaaggaatgcagtttccttgccatgggaagaagttccaacctttgaaaga
ccttcaaaacctgcaactcctaaacctgttgaaaaaactagtgcaacaccagaaaaagat
ggtggaattgtttttgactggagtgaggatgtagaaaagagttctatgttggaacaagaa
gcacttagtgatgttccatcgagaagttcatcagtaatcagtctggtagacaacagtgcc
aatcaggtatcttcacaaactaatggaaactctttgaggaaatctaaaagcaaaaataga
aaaagagataagagaaggagaagaagtcgtagtaacatgagagacaggagcaaagaaaga
ccgaatgaatccgagtcattcgataacttcaaggtaccatccgagccagcacgcagacgc
ccttcgagagatagtagctttgaaagattcagcagaggttccaagattcgtagcagggag
ggtagcttcgataggatgcgaaaatcttcgacaagtgaatgcgagaactggagagaagaa
attcgagtgagacaagagcaggagaaagagaaggatataaaaagaaataggaacaactct
ggtactagtgactttcaaagaagcaggcagaattctgaagatactcagaccaagaggaga
agttgtgatctttctgatattgatgtaaagaaagcaggtgttcttgttattcccccagaa
cattcacaggatgctgttacttcatcatctcctcctagtttgaatcatccccgatatgct
aatgccagtaagcaaaacgttccacatactagaagcttatttgaccctaacaaccctgac
aaacctataatcgttaagtcatccacttcaagagttgccccaggtattcccgaaaataaa
gaaataatacctccaccagctgtctatgatatgtttggaaatatttgccccgcttggtat
atggaagactccgaagaaaatcagatgtcccattatcgcgaaatgataaaagatgtgaaa
agagcagatcaagaaatacaatatgccatccactcggggatcttcctgaagaattggtca
gccgttgaaacttttagacaatttttgaaagagtccttgcagtactttttgggtaaagat
ctcaaattcagccaaacctgcaatatagaacagcatttctggaagttgttgtattacaac
ataatcgaaaggattagaaaagctagtcaagaggacgaagaaaacaaagaggattataag
cagtttgtgttgtatttggtcgacgaaggaacacagtatttcgagggattgttgaaattt
ctggaggaaacttatcaatttcaattgagcgattttttgggcgcgaatcaggctatacca
caaaaaggattggggtacattggattggccctgatttcggcacagaaaattctcattttc
ttgggcgatttggcaagatacaaagaacagatcaatgagaccatgaatttcggaaaatgt
aggcagtggtatataaaagcgcatgaaataaatcccaaaaatggtagaccttataaacaa
ttggctcatttagctgtgtgtgcacgtagaaaattagatgccgtttattattatgtaaga
agtttgatgtcttctaatccaatatactcatcaagggaaaagctgaccaatttgttttat
gaaaatagtagaaagtatgaacaaggagagaaaaaacgtcgcgaagaaaaattggaaaga
gctaggcaatacatgaaagaaaaggaaagcgatcataattccaagccaaaatcactcaga
aaggaaacgtggattagaccagatggagggcaaagagttcatagaacgactcaagctgtg
cagaaagaagattccgaagaagaaaatctgttgctgctgagtagcgtcgaggttaacaaa
cgatttgtgataagttatcttcatgttcatgggaagttaataactaaaattgggatggac
agttttcaagacgccgccttgcagatgctgaaggagttcagggccttgctgcaacactcg
cctctgccgttgccgactaacaggctgcttcagctcctggcgctcaatatgttcgctata
gagagcaaccaactcaaagatcccgaacaaagactcagcggctacagatcagaatttcaa
gaatgcgcacttgttgtttcgttgcaaatgttcaatctcattctggaaaggtgcgtatcc
cttctagacgaacacctggcttcgaaacctgaaaaactcaacgaagtttcgatggacacc
cacgtattgttgcctcccatcaagatttggtgcgactggatgctgtgccatagcagcgta
tggaaccctcctccgtcaacgcaagactatagagtaggggctcccgtggacccttggacc
agattggcgatgttgataaatctgctgagacaattggatcagacagcgtcgtccgtattc
tcgaatgagcagcttgaaggctacgagctcctgagactaccagaagacaatgttttgagc
ggttttactcctctcatgctcaaagttgacgaaccaacttacgtacccaaaaactacgac
ctagaatcgggccagttcgtgttgaggctcaacaaactgctcttcttcggtacggagttc
ttgtgcggcttagaacctcctgtcttgaagttggaaatcgacaatgatttcacagagtat
attagcgtggtcagcaatgccaacagtagggattctccgcaatctgtggaagagatgaac
gatcaggaagttttggtggaaagttacagcgataatgagtccaaaatctcgagtataggt
gaggacacctcttctgaagttcgggatcttcttactaggaaagtagaacttgaaaaatgg
cacaagagacatcagttacatatggaaagagttgaaaagattttggcccagtcgatcatt
agcgtccacatcgaagtgcttcccaaatatttggtacccgatacgaactgtttcatagac
tatctggacgaaatagaaaccatcatcaaagttcccaacgccccctacaccataatggtg
ccgatagtagtcctcgcagaactggaaggtctcggacgtggcgggatctcgccagcttcc
ggaacgctgtctaagaacgatccagagcatatacgtaaggtaggcgaggcggccaggaag
gccctggtgctgctcaagaagcgccatcataacatcaagtgcgtcaccaccaagggggca
tttttgaacactaccacgtttacaacggaagaggatgcgtcgacaaattcggccaaaaac
gacgataagatcttgaccacctgtttgaatttatccaagtctcatatgaaagagatggag
agtaaagaaggtgaaccaaggcaaatatatagagaagtagttcttttaacagacgataga
aatttgagggtgaaagctcattctaccgacgttccagttagggaattgtcggatttcatg
aagtgggctggactaggatga
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