Harmonia axyridis (harlequin ladybird): 123686083
Help
Entry
123686083 CDS
T10650
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
123686083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haxr03400
]
123686083
Enzymes [BR:
haxr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
123686083
DNA repair and recombination proteins [BR:
haxr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
123686083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
RNA_ligase
DNA_ligase_A_C
BRCT
BRCT_2
FliS
mRNA_cap_enzyme
DNA_ligase_IV
Motif
Other DBs
NCBI-GeneID:
123686083
NCBI-ProteinID:
XP_045482020
LinkDB
All DBs
Position
X:14399368..14402743
Genome browser
AA seq
858 aa
AA seq
DB search
MLHFQVICDLLDEVQKAQGHSSKLEILKMKFAKLRDDTKNFENFYQIIRLILPEMDHGRK
TYNMKENKIGRAIIKMLNLGDGNDKKNLLNHSKISNVSNIIDFADIVHTTLRKYISRKQS
SINVSELNNHLDLIANRDSDTKLDEIMLKMFRSLTNSESKWIVRIMLKKLKLGIDNNKIL
NVFHPDAVEYYKSNSNLKKVCEYFWDPTVKLNLLNLNLFEHFQPMLSKRSDAHSFTRDFP
ENRTYFVETKFDGERFQLHMKDGQFKYFSRNGFDYTKEFGEDFRSGILTPKLKNVLNDDV
RNIILDGEMMLWHKKKKKFGSKGMTLDVKKLHATNGFYQPCFCVYDILLINDQILTNTVL
EERLKLLQHAVKRTVEGALVLSKYQECNNRQDIINILNESMDNEQEGIVVKDPKSIYKYK
DRKSGWFKIKMEYFEDVVTDLDLILMGGYHRANSKELKSFLVGVFSNDKDKSVLSFGKVS
SGLNFEEIDNVNKRFSDYGFLREEFKSTTEGKLKFGKDIPDVWLKPENSLIFTVRATELV
RCSDESFGTSYTIRFPRILKVRDDKSYEDCLSVNELLELCQKNKAVIKLNKRHLELEEIL
TVKRQKKIKHIDVDKDALMQISNFLSGMKFFVLTRNEELSKGKIEDLIERYGGSFCLQRE
EDVDIVIVGTITSEVIQLIKKENKFDVIKVEWLQRVTRANRLLKYKQDEVICIGNGYYNC
LADDVDMYGDSYSEELNPESLKSRLNFMAEKEHEMNLNNSIMFKADLPLFYKFTAYFDSY
ESINNFTSRLIYNSFLDEIEFKYRMGNVATTLTPEVNLIVIGPSNGERKYILENYAKEIN
CINYQIVESRQLYEDEEF
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgcttcattttcaagttatttgtgaccttctagacgaagtacaaaaagcgcaaggccat
agcagcaaattggaaattttgaaaatgaaatttgcaaaactaagagacgatacgaaaaac
ttcgaaaatttctaccaaataatcagattaattcttcccgaaatggaccatgggaggaaa
acttataatatgaaagaaaataaaattggcagagcaataattaaaatgctgaatttggga
gatggaaatgataaaaaaaatttactcaatcacagtaaaatatctaatgtttctaatatt
atcgatttcgctgatattgtacatacaacacttagaaagtatatttctagaaagcaatcc
agtattaacgtttctgagttaaacaatcatcttgatcttattgcaaatcgtgactctgat
accaaactagatgaaattatgttgaaaatgttcagatctctaactaattccgaaagtaaa
tggattgtcagaattatgttgaaaaaattaaaactaggcattgataacaataaaatacta
aatgtatttcatcctgatgctgttgaatattataaatcgaacagcaatttgaagaaagtt
tgtgaatatttttgggaccccacagtaaaactgaatttattgaatttgaatctttttgaa
cacttccaacccatgctttctaaaagaagtgatgcacattctttcacaagagattttcca
gaaaatagaacatatttcgttgagacaaaattcgatggtgaaagatttcaattacatatg
aaggatggacaattcaaatatttttcaaggaatggtttcgattataccaaagaatttgga
gaagatttcagaagcggtattttaacaccaaaactgaagaatgttttgaatgatgatgta
aggaatatcatattagatggtgaaatgatgctatggcacaaaaagaagaaaaagtttgga
tcgaaaggtatgacccttgatgttaaaaaattgcatgcaacaaatggattttatcaaccg
tgtttttgtgtttatgatatactccttattaatgaccaaatattgactaatacagtattg
gaagaaagattaaaactgctgcaacatgcagttaaaagaactgtagaaggggctttagtt
ttgagcaaatatcaagaatgtaacaaccgacaagatattatcaacatcttgaatgagtcg
atggataatgagcaggagggtatagttgtaaaagatccaaaatcaatatacaaatataag
gatcggaaaagtggttggttcaagattaagatggagtatttcgaagatgtagttaccgat
ttggacttgatattgatgggtggttatcacagagcaaattctaaggaattgaaatccttt
cttgtgggggtattttccaatgataaagataagagtgttttgtcttttgggaaagtttca
agtgggttgaattttgaagaaattgataatgtgaacaaaagattttctgattatggattt
ctcagagaagaattcaaaagtactactgaaggaaaacttaagtttggtaaagatattcct
gatgtttggctgaagccggaaaacagtttaatttttacagtacgtgcaactgaactggta
agatgcagtgatgaatcttttggtacttcttataccattcgttttccaaggattttgaaa
gtgagagatgataaatcttacgaagattgcctttcagttaatgaattgttagaactctgc
cagaagaacaaagctgttattaaactcaataaaaggcatctagagctggaagagattctc
acagttaaaagacaaaaaaaaataaagcatattgacgttgataaagatgctttgatgcag
ataagcaattttttaagtggtatgaaattttttgttctaacgagaaatgaggaattatct
aagggaaaaattgaagatctcatagaaagatatggtggtagcttttgtcttcagagagaa
gaagacgttgatatagtgattgttggaacaatcacttcagaagtaatacaactaataaaa
aaagaaaataaatttgatgttataaaggtagaatggctgcaaagggtaaccagagctaac
cgtttattgaaatataaacaagatgaagttatctgtataggaaatggttattacaattgt
ttagccgatgatgttgatatgtatggggattcttactcagaggaactgaaccctgaatcg
ttaaagagcagactgaattttatggcagaaaaggaacatgaaatgaatcttaacaattcc
ataatgttcaaggcagatttacctcttttctataaattcactgcttactttgattcctat
gaatcaataaacaatttcacttcaagattaatttacaactcgttcttagatgaaattgaa
tttaagtacagaatgggaaatgttgcaacaacattgacaccagaagtaaatcttattgtt
attggaccgagtaatggagagagaaaatatatacttgagaattatgcaaaagagataaat
tgtatcaattatcaaatagtggagagtcgtcaactgtatgaagatgaagaattttaa
DBGET
integrated database retrieval system
