Halomicrobium sp. ZPS1: GBQ70_02760
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Entry
GBQ70_02760 CDS
T07700
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hazp
Halomicrobium sp. ZPS1
Pathway
hazp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hazp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GBQ70_02760 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hazp03400
]
GBQ70_02760 (nth)
Enzymes [BR:
hazp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GBQ70_02760 (nth)
DNA repair and recombination proteins [BR:
hazp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GBQ70_02760 (nth)
Prokaryotic type
GBQ70_02760 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
DinI
HHH_8
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
QFR19420
UniProt:
A0A5P8LTC6
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All DBs
Position
complement(529664..530350)
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AA seq
228 aa
AA seq
DB search
MGTTLATREAQAEEVIGRLHEEYPDSAISLNYASRLELLVAVVLSAQCTDERVNEVTADL
FEKYQSARDYAEADEEQLAEDIYGITFHNNKAGYLTAAGQIMVEEYDGAVPDTMSGLTDL
PGVGRKTANVVLQHGHDVVEGIVVDTHVQRITRRLGLTDEERPEAIEEDLMPIVPESEWQ
QFTHLLIDHGRAVCDARNPDCGDCVLADICPSQKGDGDVDLASGEPWS
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgacgctcgcgacgcgggaggcacaggccgaggaagtcatcgggcgactgcac
gaggagtatcccgactccgcgatctcgctgaactacgccagtcgactggagctgctcgtc
gccgtcgtcctctcggcgcagtgtacggacgaacgggtcaacgaagtgaccgcagacctc
ttcgagaagtaccagtccgcccgcgactacgccgaggccgacgaggagcaactggccgag
gacatctacgggatcacgttccacaacaacaaggccggctacctcacggcggccggccag
atcatggtcgaggagtacgacggggcggtgccggacaccatgtccgggctcaccgacctg
ccgggcgtgggacgtaagacggccaacgtcgtgctccagcacggccacgacgtggtcgag
gggatcgtcgtcgacacgcacgtccagcgcatcacgcgacgactgggactgaccgacgaa
gagcgccccgaagcgatcgaggaagacctgatgccgatcgtccccgagtcggagtggcag
cagttcacacacctgctgatcgaccacggccgcgcggtgtgtgacgctcgcaaccccgac
tgcggcgactgcgtgctggccgacatctgtccgtcccagaagggcgacggcgacgtggac
ctcgccagcggcgagccctggtcgtga
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