Hyalella azteca: 108666523
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Entry
108666523 CDS
T07535
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
hazt
Hyalella azteca
Pathway
hazt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108666523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hazt03041
]
108666523
Spliceosome [BR:
hazt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
108666523
Complex C
U5 SnRNP specific factors
108666523
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EFTUD2
EFG_C
GTP_EFTU
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
Motif
Other DBs
NCBI-GeneID:
108666523
NCBI-ProteinID:
XP_047741263
UniProt:
A0A979FVJ6
LinkDB
All DBs
Position
Unknown
AA seq
1061 aa
AA seq
DB search
MDADLYDEFGNYMGPDLDSDEEEEIEDGVAEEDIDINGVEEGDDDDDEGIASQAVVLHED
KQYYPAPEDVYGPDVETIVHEEDAQPLTQPIIQPIKVKKFRLVEKNLPKTVYDLQFLTDL
QDEPSLVRNIALVGHLHHGKSTFMDCLVHQTHPEFRSVFLFLLHAQSVLSSGQLFSFLLH
AKLPKMCFTKKLLRARHIALSSLQSDRHHNTLDHNTLDHNTLDHNTLDHNTLDHNTLDHN
TLDHNTLDHNTLDHNTLDRNTLDRSTLDHNTVDRSTLDHITVDRSTLDHNTVDRITLDHN
TVTAAMRLCDGVVIFVDAAEGVMLNTQRLIKHALQERLSIALCINKIDRLVLELKLPPLD
AFYKLRHIIEEVNSLIVQNGDTENKNMVSPLLGNVCFASSQYSICFTLKSMAKLYCRHYG
FDVRLEDFAKRLWGDVYFNPRTRKFAKKPPTSSTQRSFIEFILEPLYKIFSHIVADVDLH
LPELMDELGLHMTKEEQNMNIRPLIKNFMSKFIGDFEGFTDMCVTHIPSPKDNSVNKIQT
TYTGPMDNYLTEEMMRCDPDGPLVVHTTKQYPNEDATAFNVFGRVLSGTIESNQKVRVLG
EKYTLTDEEDSRVLTVGRLWIHEARYNIEVKYVPAGNWVLIEGIDEPIVKTATITQADPP
ITELHIFRPLKFNTHSVIKIAVEPVNPSELPKMLDGLRKVNKSYPLLNNKVEESGEHVIL
GTGELYLDCVMHDLRKIYSEIDIKVADPVVSFCETVVDTSSLKCFAETPNKRNKITMIAE
PLERGLAEDIEGEVVHISWDNRKLGEFFQTRYDWDLLAARSIWAFGPDHCGPNILVDDTL
PSEVDKALLGSVRESIVQGFQWATREGPLCEEPIRNCKFKILDAVMASEPLHRGGGQVIP
TSRRVAYSAFLMATPRLMEPYLFVEIQAPADCVSSVYTVLTKRRGHVTQDAPVAGSPLYT
VKAFIPAIDSFGFETDLRMHTQGQAFCLSVFHHWQIVPGDPLDKSIVIRPLEAQMATHLA
REFMIKTRRRKGLSEDVSINKFFDDPMLLELARQDVTLNYA
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagatctctatgatgagtttgggaattatatgggcccagacttggatagtgat
gaagaagaagaaattgaagatggtgttgcagaagaggatattgatattaatggagttgaa
gaaggagatgacgatgatgatgaaggcattgcatcacaagcggtggtactccacgaagac
aagcaatactacccagctcctgaagacgtctacgggcctgacgtagagaccattgttcat
gaggaagatgctcagccactcactcagccgatcattcagccaataaaggtgaaaaagttc
cggctggtggagaagaacctgcccaagacagtgtacgacctgcagttcctgacagaccta
caggacgagcccagcctcgtgcgcaacatcgcgctcgtagggcacctgcatcacggcaag
agcaccttcatggactgccttgtgcaccaaactcatcctgagttccggtcagttttctta
tttctcttacacgctcagtctgtgctcagttccggtcagttattctcatttctcttgcat
gctaagcttcctaagatgtgcttcactaagaaacttctgcgtgccaggcatatagcattg
agttctctgcaatctgaccgacaccacaacactctagaccacaacactctagaccacaac
actctagaccacaacactctagaccacaacactcttgaccacaacactctagaccacaac
acgctagaccacaacactctagaccacaacactctagaccacaacactcttgaccgcaac
actcttgaccgcagcactctagaccacaataccgtagaccgcagcactctagaccacatt
accgtagaccgcagcactctagaccacaataccgtagaccgcatcactctagaccacaat
accgtgaccgcggccatgcgactgtgcgacggagtcgtgatcttcgttgacgctgcagaa
ggagtgatgctcaacacccagcgcctcataaagcatgcgctgcaggagcggctcagcatc
gccctctgcataaataaaatagacaggcttgtgctggagctcaagctgcctcctctcgat
gccttctacaagctacggcacatcatcgaggaggtcaactctctcattgttcagaatggc
gacactgagaacaagaacatggtttctcccttgctgggcaacgtctgtttcgcgagttcc
caatactccatttgcttcacgctcaaaagcatggccaaactttactgccgccattacggc
tttgacgttcggctcgaggacttcgctaagcgtctgtggggcgacgtctacttcaacccg
agaaccaggaagtttgccaagaaacctccaacctccagcacgcagagaagcttcatcgag
ttcatcctcgaaccgctgtacaaaatcttttcgcatattgttgctgatgtggatttgcat
ttgcctgagctcatggatgaactgggattacacatgaccaaagaagaacagaacatgaac
atccggccgctgatcaagaacttcatgtcaaagttcattggagactttgaaggcttcact
gatatgtgcgtcacccatattccgtctccaaaagataacagtgttaacaaaattcaaacc
acgtatacaggccccatggacaactacctgacggaagaaatgatgcgctgtgacccagac
ggccctcttgtggtgcacacaacaaagcagtaccctaatgaagacgccacggccttcaat
gtgtttggacgcgttctgtctggcactattgagtccaaccagaaagtgcgcgtgctaggg
gagaagtacactctcacggacgaggaagactcgcgcgtgctcactgtaggcaggctttgg
atacacgaggcgcgttacaacatcgaagtgaagtatgtgcctgctggcaactgggtcctc
attgagggcattgatgaacccattgtcaaaactgccaccatcactcaggccgatccgcct
atcacggaactgcacattttccgacctttgaagttcaacactcactctgtgataaaaatt
gccgtggaacctgtcaacccatctgaactgcccaagatgctggacgggcttcgtaaagtt
aacaaatcttatccacttctgaacaacaaggttgaggagtctggtgaacatgtcatcctg
ggtactggtgagctgtacctcgactgtgtcatgcacgacttgagaaaaatttactcggaa
atcgacatcaaagttgctgatcctgtagttagcttctgtgaaacagtcgtggatacctca
tcattaaaatgctttgcagaaactcccaacaagcgaaataaaatcaccatgattgccgaa
cctcttgaaagaggattggctgaagacattgaaggtgaagtggtccacatttcgtgggac
aacagaaaattaggagagtttttccagactcgctacgactgggatcttcttgctgcgcga
tctatttgggcattcggtcctgaccattgcggtccaaacattcttgtggacgatacgctg
ccgtccgaggtggacaaagctcttctcggatcagtgcgcgaatcaattgttcaaggtttt
cagtgggctactcgtgaagggccgctgtgtgaagaacccatcagaaattgtaagttcaaa
attcttgatgccgtcatggccagcgagcctctacacagaggaggaggccaagtcattcca
acctcccgtagagttgcgtactccgccttcctgatggccacacctcgtctcatggagcct
tacttgttcgtggaaattcaagccccagctgactgcgtctcttcagtgtacaccgtattg
accaagagacgtggccacgtcacgcaagacgctcccgttgctggctcgcctctctacacc
gtcaaggccttcatccccgccatcgactcgtttggatttgaaactgacttgcgcatgcac
acccagggccaggctttctgcctgagcgtatttcatcattggcagatcgtccctggcgat
cctttggacaagagtatagtcatcagacctcttgaggctcagatggcaactcatttggct
cgagagttcatgatcaaaacgaggcgcaggaagggactcagtgaagatgtctctatcaac
aagttcttcgacgaccctatgttgttggagcttgctcgtcaagacgtcacgctcaactac
gcttaa
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integrated database retrieval system
