Halomonas beimenensis: BEI_3131
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Entry
BEI_3131 CDS
T05125
Name
(GenBank) DNA ligase (NAD(+))
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
hbe
Halomonas beimenensis
Pathway
hbe03030
DNA replication
hbe03410
Base excision repair
hbe03420
Nucleotide excision repair
hbe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BEI_3131
03410 Base excision repair
BEI_3131
03420 Nucleotide excision repair
BEI_3131
03430 Mismatch repair
BEI_3131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hbe03032
]
BEI_3131
03400 DNA repair and recombination proteins [BR:
hbe03400
]
BEI_3131
Enzymes [BR:
hbe01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BEI_3131
DNA replication proteins [BR:
hbe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BEI_3131
DNA repair and recombination proteins [BR:
hbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BEI_3131
NER (nucleotide excision repair)
GGR (global genome repair) factors
BEI_3131
MMR (mismatch excision repair)
DNA ligase
BEI_3131
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BEI_3131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
Nlig-Ia
HHH
PTCB-BRCT
5_3_exonuc
FeoA
DZR_2
Motif
Other DBs
NCBI-ProteinID:
ATJ84118
UniProt:
A0A291PB81
LinkDB
All DBs
Position
complement(3320634..3322733)
Genome browser
AA seq
699 aa
AA seq
DB search
MPASSFDAFALDRDTEDMTQPDQDTRDEAARLRAELEDANYRYYVLDAPRMTDADYDRRL
RRLQEIEAEYPELVTPDSPTQRVGAAPAEGFPEVEHAVPMLSLDNAFDEEELSAFVRRVA
ERLEADPEGIAFCCEPKLDGAAVSLVYEHGELTTGVTRGDGRTGEGITSNLRTLRSIPLK
LRGNRPPELLEVRGEVIMSHEGFEDLNERAREEGSKVFANPRNAAAGSLRQLDPRITARR
PLEFSAYQVARIEPDAGDASHSELMARLADLGFRSSRELEVVEGARGVIDYCRRLGEKRD
GLGYDIDGVVIKVDDLRRQRELGFVARAPRWAIAFKFPAQEQTTRLNDVEFQVGRTGAIT
PVARLEPVSVAGVTVSNATLHNADEIARLGVMIGDTVAIRRAGDVIPQVVRVQREDRPDD
AREIVFPERCPVCDSQIERLEGEAVARCSGGLYCAAQRKEALKHFASRRALDIDGLGEKL
IDQLVERDWVKSPADLFGLAAEDLAELPRMGQKSSENLVAALEKAKATTLPRFIFALGIR
EVGEATAANLARHFGSLEALMAADREALEAVEDVGPIVAAHVHTFFRQPHNRETIQALID
AGVHWEETEVEAGPTPLEGQTWVLTGTLDTMTRDEGKARLQALGAKVSGSVSKKTACLVA
GEAAGSKLTKAEQLGVEVIDEATFLERLAAWENGEEIGA
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttcgagcttcgacgccttcgctttagatcgagacacggaagacatgacccag
cccgatcaggatacccgtgacgaggcggcgcgcctgcgcgccgaactcgaggacgccaac
taccgctactacgtgctggacgcgccacgcatgaccgacgccgactacgaccgtcggctg
cgccgcctgcaggagatcgaggcagaataccccgagctcgtgacgccggactcgcccacc
cagcgggtgggggccgcccccgccgagggattccccgaggtggaacatgcggtgcccatg
ctgtcgctggacaacgccttcgacgaggaggagctgtcggccttcgtgcggcgggtggcc
gagcggctggaggccgatcccgagggcatcgccttctgctgcgaacccaagctcgacggg
gccgccgtctccctggtctacgagcacggcgagctgaccaccggggtcacccgcggcgac
ggccggaccggcgagggcatcacctccaacctgcggaccctgcgctccatccccctgaag
ctgcgagggaatcgtcctcccgaactgctcgaggtgcgcggcgaggtgatcatgagtcac
gagggcttcgaggacctgaacgagcgggcccgggaggagggcagcaaggtcttcgctaac
ccccgcaacgccgccgccggcagcctgcgccagctcgacccgcgcatcaccgcccggcgg
cccctggagttcagcgcctaccaggtggcgcgcatcgagcccgacgccggtgacgccagc
cacagcgaactgatggcgcggctcgccgacctcggcttccgcagcagccgcgagctcgag
gtggtcgagggcgcccggggcgtgatcgactactgccggcggctcggcgagaagcgcgat
ggcctcggctacgacatcgacggcgtggtgatcaaggtcgacgacctgcgccggcagcgc
gagctgggcttcgtggcccgggcgccgcgctgggccatcgccttcaagttcccggcccag
gagcagaccacccggctcaacgacgtggaattccaggtgggccgcaccggcgccatcacc
ccggtggcccgcctcgagccggtgtcggtggccggggtcaccgtctccaacgccaccctg
cacaacgccgacgagatcgcccggctgggcgtgatgatcggcgataccgtggccatccgc
cgggccggcgacgtcatcccccaggtggtgcgcgtccagcgggaggatcgccccgacgat
gcccgggagatcgtctttccggagcgctgtccggtgtgcgactcccagatcgagcgcctg
gagggcgaggccgtggcgcgctgctccgggggcctctactgcgccgcccagcgcaaggag
gccctgaagcacttcgcctcgcgtcgggctctcgacatcgatggcctgggcgagaaactg
atcgaccagctggtggagcgcgactgggtgaagtcgccggcggatctcttcggcctggcc
gccgaggacctggccgaactcccgcgcatgggccagaaatcctccgagaacctggtggcg
gcgctggagaaggccaaggccaccaccctgccacgcttcatcttcgccctgggcattcgc
gaggtcggcgaggccaccgccgccaacctggcgcggcatttcggcagcctggaggcgctg
atggccgccgatcgcgaggccctggaggcggtggaggacgtgggccccatcgtcgccgcc
catgtgcacaccttcttccggcagccccataaccgcgagaccatccaggccctgatcgac
gccggggtgcactgggaggagaccgaggtggaagccgggccgacgccgctggagggccag
acctgggtgctcaccggtaccctcgacaccatgacccgggacgagggcaaggcccggctc
caggcgctgggcgccaaggtgtcgggcagcgtgtcgaagaagaccgcctgcctggtggcc
ggggaggccgccggcagcaagctgaccaaggccgagcagctcggcgtggaggtgatcgac
gaggccaccttcctcgagcggctggccgcctgggagaacggcgaggagatcggcgcatga
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integrated database retrieval system
