Halogeometricum borinquense: Hbor_02420 Help Entry Hbor_02420        CDS       T01359                                  Name (GenBank) DNA ligase, NAD-dependent   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism hbo  Halogeometricum borinquense Pathway hbo03030   DNA replication hbo03410   Base excision repair hbo03420   Nucleotide excision repair hbo03430   Mismatch repair Brite KEGG Orthology (KO) [BR:hbo00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     Hbor_02420    03410 Base excision repair     Hbor_02420    03420 Nucleotide excision repair     Hbor_02420    03430 Mismatch repair     Hbor_02420  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:hbo03032]     Hbor_02420    03400 DNA repair and recombination proteins [BR:hbo03400]     Hbor_02420 Enzymes [BR:hbo01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      Hbor_02420 DNA replication proteins [BR:hbo03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      Hbor_02420 DNA repair and recombination proteins [BR:hbo03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      Hbor_02420    NER (nucleotide excision repair)     GGR (global genome repair) factors      Hbor_02420    MMR (mismatch excision repair)     DNA ligase      Hbor_02420   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       Hbor_02420 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 HHH BRCT DNA_ligase_ZBD 5_3_exonuc HHH_8 HHH_3 RUBY_RBDX HMBD Motif Other DBs NCBI-ProteinID:  ADQ65852 UniProt:  E4NSW4 LinkDB All DBs Position complement(222451..224535) Genome browser AA seq 694 aa AA seqDB search MRDGGKLAYADPDNPYLTDPDTDFEPVESLSAEAAEREARLLREAVREHDHRYYVAADPL VADRTYDALFNRLQELEDAFDLDDESSPTRRVGGEPLDELDTVEHVAPMLSIDQSVEAAD VRDFDRRVREAVGEVRYVCEPKFDGLSVEVVYEDGEYVRAATRGDGERGDDVTAQVRTIR SIPLRLRGDYPDFLTVRGEVYMPRDAFQELNRERIEADEEPFANPRNAAVGTLRQLDPSV TADRPLDCFFYDVLDASDVPETQTATLSRLDSWGLRTNDRVESVADIDGAIAYRDELMAA REDLNYEIDGTVIKVDRRDQREQLGETSRSVRWAFAYKFPARSEVTTMTDVVVQVGRTGR LTPVALLDPVDVGGVTVSRASLHNPEEIERLGVNIGDEVRIKRAGDVIPDVEEVVEKHSE GTFDFPEECPVCGSPVNREGPLAYCTGGLTCEAQLVRAVDHYAMRGALDIEGLGGERVEQ LVDEGLIEGLPDLYRLERDELSELEGWGKTSADNLVTEIEATKSPELSSFLVGLGIPEVG GSTARNLARAFGSLDAVMDASVEELEEVEDVGPTVAEKIREFFDTESNRKAIAEMRSLGV EPETAETAGGDELDGLTFVFTGSLAVTRGDAQELVQAHGANATSSVSGNTDYLVIGDNPG QSKRDDAAANDVPVLDEDEFAELLAEKGIEYPPE NT seq 2085 nt NT seq  +upstreamnt  +downstreamnt gtgcgagacggcgggaaactggcgtacgccgatcctgacaacccgtatctcaccgatccg gacaccgacttcgaaccggtcgaatcgctctcggccgaagcggccgaacgtgaggcgcgt ctcctccgcgaggccgtccgcgagcacgaccaccgatactacgtcgcggccgatccgctc gttgccgaccggacctacgacgccctgttcaaccgcctacaggaactcgaagacgcgttc gacctcgatgacgagtcgagtccgacccgccgcgtcggcggcgaaccgctggacgaactc gacaccgtcgaacacgtcgcgccgatgctctctatcgaccagtctgtcgaagcggctgac gtgcgtgacttcgaccgccgagtgcgcgaagcggtgggcgaggttcgctacgtctgcgaa ccgaagttcgacggtctctcggtcgaagtcgtctacgaagacggcgagtacgttcgcgcg gccacgcgcggtgacggcgaacgcggcgacgacgtaacggcgcaagtccgaacgattcgc tcgattccgctcagacttcgcggcgactaccctgacttcctcacggtccgcggggaggtg tacatgccgcgcgacgccttccaagaattgaatcgggagcgaatcgaggcggatgaggag ccgttcgccaacccgcggaacgccgccgttggcaccctccggcagttggacccgtccgtg accgcggaccgaccgctggactgtttcttctacgacgttctcgacgccagcgacgtcccc gagacgcagacggcgacgctgtctcgactggattcgtgggggcttcggacgaacgaccga gtcgagtcggtcgcagacatcgacggcgcgatagcgtaccgtgacgagttgatggccgcg cgcgaggatctgaactacgaaatagacggcaccgtcatcaaagtggaccgccgcgaccaa cgcgagcaactgggtgagacgagtcggtcggtcagatgggcgttcgcgtacaagttcccc gcacggtcggaagtgacgacgatgaccgacgtggtggtgcaggtgggtcggaccggccgt ctcacgcccgtcgctctgctcgaccccgtggacgtgggcggcgtcacggtctcgcgggcg tcgctgcacaaccccgaggaaatcgaacggttgggagtgaacatcggcgacgaggtgcgt atcaagcgtgcgggcgacgtgataccggatgtagaagaagtcgtcgagaagcactccgaa ggaacgtttgacttccccgaggaatgtcccgtctgtggcagtccggtcaaccgtgagggg ccactcgcgtactgtaccggtggtctgacctgcgaggcgcaactggttcgcgccgttgac cactacgcgatgcgcggcgcactcgacatcgaaggactcggtggcgaacgtgtcgagcag ttggttgacgaaggtctcatcgaaggcttaccggatctctaccgtctcgaacgcgacgaa ctgtcggaactggaggggtggggaaagacgagtgcggacaacctcgtgacggagatagaa gcgacgaagtcgcccgaactgtcgtcgttcctcgtcggtctcggaatccccgaagtcggc ggttcgacggcgcgtaacctcgctcgcgcgttcggcagtctcgacgccgtgatggacgcc tccgtagaggagttagaggaagtcgaagacgtgggaccgaccgtcgccgagaagattcgt gagttcttcgacaccgagagcaaccgcaaggccatcgcggagatgcgttcgctcggcgtc gaacccgaaacagcggagacggcgggcggcgacgaactcgacggactgacgttcgtcttc accgggtcgctggcggtgacgcgcggggacgcacaggagctagtgcaggctcacggtgcg aacgcaacgtccagcgtctcggggaacaccgactacctcgtcatcggcgacaaccccggg cagtcaaaacgcgacgatgccgcggcgaacgacgtaccggtactcgatgaagacgagttt gcggagttgctggctgagaaaggaatcgaatatccgcccgagtaa

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